Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 RNU1-129P-201ENST00000384064 167 ntBASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 PGAM5P1-201ENST00000518923 814 ntBASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 KRT19P2-202ENST00000557173 1012 ntBASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 U1.21-201ENST00000580816 167 ntBASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 AL031055.1-201ENST00000606362 631 ntBASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 AC025580.3-201ENST00000617932 1424 ntBASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 AC013268.4-201ENST00000637413 2228 ntBASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 PPT1-215ENST00000641471 2368 ntBASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIN7CQ9NUP9 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 AC068418.2-201ENST00000577309 3703 ntBASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 PMS2P4-201ENST00000412466 1052 ntBASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 AC245100.5-201ENST00000452108 331 ntBASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 TMBIM7P-203ENST00000641617 1718 ntBASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 AC023157.3-201ENST00000619086 2088 ntBASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 AC023824.1-201ENST00000562945 2975 ntBASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.35□□□□□ -0.27
LIN7CQ9NUP9 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms