Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ECHDC1Q9NTX5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 CICP13-201ENST00000422015 2789 ntBASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 Z97205.2-201ENST00000564697 1639 ntBASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ECHDC1Q9NTX5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ECHDC1Q9NTX5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ECHDC1Q9NTX5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 AC074338.1-201ENST00000416825 156 ntBASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 AC009477.1-201ENST00000452936 217 ntBASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 ZNF890P-202ENST00000530367 1156 ntBASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ECHDC1Q9NTX5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC1Q9NTX5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms