Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MIR648-201ENST00000385046 94 ntBASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 AC126365.1-201ENST00000578585 1514 ntBASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 NME1-209ENST00000511355 1645 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AC090616.6-203ENST00000579186 1945 ntBASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 MAX-212ENST00000555932 1673 ntTSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 SHROOM2P1-201ENST00000434773 2384 ntBASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 MTHFR-210ENST00000641407 2387 ntBASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 CSPG4P13-202ENST00000567704 4801 ntBASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AL805961.2-201ENST00000642139 4817 ntBASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AC091799.1-201ENST00000422823 811 ntBASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CDC42SE1Q9NRR8 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms