Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 RHOQP1-201ENST00000555758 579 ntBASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 AC069224.1-201ENST00000566372 1715 ntBASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM7Q9NR12 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 AP001889.1-201ENST00000525414 633 ntBASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 AC068587.3-201ENST00000526613 355 ntBASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 AL359711.2-201ENST00000563105 872 ntBASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 Z97205.2-201ENST00000564697 1639 ntBASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM7Q9NR12 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PDLIM7Q9NR12 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDLIM7Q9NR12 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDLIM7Q9NR12 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDLIM7Q9NR12 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 C2orf69P2-201ENST00000562032 1123 ntBASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM7Q9NR12 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms