Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 AL391005.1-201ENST00000623953 2435 ntBASIC16.55■□□□□ 0.24
HPS4Q9NQG7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 AC112492.5-201ENST00000421897 457 ntBASIC16.55■□□□□ 0.24
HPS4Q9NQG7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 ACA64.2-201ENST00000459014 129 ntBASIC16.55■□□□□ 0.24
HPS4Q9NQG7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 AC093726.1-201ENST00000608064 963 ntBASIC16.55■□□□□ 0.24
HPS4Q9NQG7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 AC078925.2-201ENST00000624013 1973 ntBASIC16.55■□□□□ 0.24
HPS4Q9NQG7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS4Q9NQG7 HLA-A-202ENST00000376806 1854 ntBASIC16.54■□□□□ 0.24
HPS4Q9NQG7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 FO393414.2-201ENST00000405153 598 ntBASIC16.54■□□□□ 0.24
HPS4Q9NQG7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 HLA-V-201ENST00000429037 534 ntBASIC16.54■□□□□ 0.24
HPS4Q9NQG7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.54■□□□□ 0.24
HPS4Q9NQG7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 KRT17P8-201ENST00000540749 863 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms