Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 AC105250.1-201ENST00000509378 2057 ntBASIC19.71■□□□□ 0.75
UPF2Q9HAU5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
UPF2Q9HAU5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
UPF2Q9HAU5 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 AC090616.6-203ENST00000579186 1945 ntBASIC19.7■□□□□ 0.74
UPF2Q9HAU5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 AC093724.1-201ENST00000448659 1027 ntBASIC19.7■□□□□ 0.74
UPF2Q9HAU5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 KRT18P31-201ENST00000506277 1292 ntBASIC19.7■□□□□ 0.74
UPF2Q9HAU5 IGHV3-65-201ENST00000523210 341 ntBASIC19.7■□□□□ 0.74
UPF2Q9HAU5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 AP002469.2-201ENST00000531724 424 ntBASIC19.7■□□□□ 0.74
UPF2Q9HAU5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
UPF2Q9HAU5 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 TCAF2P1-201ENST00000291129 2421 ntBASIC19.69■□□□□ 0.74
UPF2Q9HAU5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 AC093458.2-201ENST00000623150 629 ntBASIC19.69■□□□□ 0.74
UPF2Q9HAU5 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC19.69■□□□□ 0.74
UPF2Q9HAU5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 AP001282.1-201ENST00000531301 1499 ntBASIC19.68■□□□□ 0.74
UPF2Q9HAU5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 AC073621.1-201ENST00000392730 636 ntBASIC19.68■□□□□ 0.74
UPF2Q9HAU5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 REXO1L6P-202ENST00000619970 1078 ntBASIC19.68■□□□□ 0.74
UPF2Q9HAU5 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms