Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 FAM220BP-201ENST00000377689 816 ntBASIC14.42□□□□□ -0.1
USB1Q9BQ65 AC107890.1-201ENST00000422478 521 ntBASIC14.42□□□□□ -0.1
USB1Q9BQ65 AC142381.1-201ENST00000426099 345 ntBASIC14.42□□□□□ -0.1
USB1Q9BQ65 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 AC007041.1-201ENST00000438989 1155 ntBASIC14.42□□□□□ -0.1
USB1Q9BQ65 AC026616.1-201ENST00000523157 525 ntBASIC14.42□□□□□ -0.1
USB1Q9BQ65 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 SPTSSB-204ENST00000617024 1292 ntBASIC14.42□□□□□ -0.1
USB1Q9BQ65 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 AC009452.1-201ENST00000640823 606 ntBASIC14.42□□□□□ -0.1
USB1Q9BQ65 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 AL035456.1-201ENST00000456064 1369 ntBASIC14.42□□□□□ -0.1
USB1Q9BQ65 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.42□□□□□ -0.1
USB1Q9BQ65 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
USB1Q9BQ65 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 AC092068.3-201ENST00000587894 2016 ntBASIC14.41□□□□□ -0.1
USB1Q9BQ65 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.41□□□□□ -0.1
USB1Q9BQ65 SPDYE14P-201ENST00000442619 822 ntBASIC14.41□□□□□ -0.1
USB1Q9BQ65 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 AC024267.1-201ENST00000582320 895 ntBASIC14.41□□□□□ -0.1
USB1Q9BQ65 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 MIR600HG-201ENST00000449175 5984 ntBASIC14.41□□□□□ -0.1
USB1Q9BQ65 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
USB1Q9BQ65 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
USB1Q9BQ65 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
USB1Q9BQ65 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms