Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 LAGE3P1-201ENST00000425356 484 ntBASIC13.57□□□□□ -0.24
CLCC1Q96S66 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 TERC-201ENST00000602385 541 ntBASIC13.57□□□□□ -0.24
CLCC1Q96S66 AL031008.1-201ENST00000619963 541 ntBASIC13.57□□□□□ -0.24
CLCC1Q96S66 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 AC148477.8-201ENST00000624298 468 ntBASIC13.57□□□□□ -0.24
CLCC1Q96S66 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.57□□□□□ -0.24
CLCC1Q96S66 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLCC1Q96S66 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 KRT8P49-201ENST00000604166 1432 ntBASIC13.56□□□□□ -0.24
CLCC1Q96S66 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 HNRNPDP1-201ENST00000439535 754 ntBASIC13.56□□□□□ -0.24
CLCC1Q96S66 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 MIR1199-201ENST00000621445 119 ntBASIC13.56□□□□□ -0.24
CLCC1Q96S66 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 AC002310.6-201ENST00000624451 1377 ntBASIC13.56□□□□□ -0.24
CLCC1Q96S66 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CLCC1Q96S66 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLCC1Q96S66 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLCC1Q96S66 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.55□□□□□ -0.24
CLCC1Q96S66 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms