Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.89■□□□□ 0.29
CASD1Q96PB1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.89■□□□□ 0.29
CASD1Q96PB1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CASD1Q96PB1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASD1Q96PB1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CASD1Q96PB1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASD1Q96PB1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CASD1Q96PB1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASD1Q96PB1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASD1Q96PB1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASD1Q96PB1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASD1Q96PB1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 AC022137.2-201ENST00000503482 481 ntBASIC16.88■□□□□ 0.29
CASD1Q96PB1 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CASD1Q96PB1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 GNRHR2-203ENST00000581100 1187 ntBASIC16.88■□□□□ 0.29
CASD1Q96PB1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 AC093813.1-201ENST00000605066 256 ntBASIC16.88■□□□□ 0.29
CASD1Q96PB1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASD1Q96PB1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CASD1Q96PB1 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CASD1Q96PB1 AC011477.6-201ENST00000604980 1927 ntBASIC16.88■□□□□ 0.29
CASD1Q96PB1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CASD1Q96PB1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 AL133267.1-201ENST00000398220 340 ntBASIC16.87■□□□□ 0.29
CASD1Q96PB1 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 AC015910.1-201ENST00000579400 975 ntBASIC16.87■□□□□ 0.29
CASD1Q96PB1 AC107373.2-201ENST00000607735 490 ntBASIC16.87■□□□□ 0.29
CASD1Q96PB1 GPR182-203ENST00000622922 591 ntBASIC16.87■□□□□ 0.29
CASD1Q96PB1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CASD1Q96PB1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CASD1Q96PB1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASD1Q96PB1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASD1Q96PB1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASD1Q96PB1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASD1Q96PB1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASD1Q96PB1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CASD1Q96PB1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CASD1Q96PB1 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASD1Q96PB1 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASD1Q96PB1 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.86■□□□□ 0.29
CASD1Q96PB1 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CASD1Q96PB1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.86■□□□□ 0.29
CASD1Q96PB1 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.86■□□□□ 0.29
CASD1Q96PB1 AC026954.1-201ENST00000429771 1293 ntBASIC16.86■□□□□ 0.29
CASD1Q96PB1 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CASD1Q96PB1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.86■□□□□ 0.29
CASD1Q96PB1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.86■□□□□ 0.29
CASD1Q96PB1 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.86■□□□□ 0.29
CASD1Q96PB1 KRT90P-201ENST00000549264 1064 ntBASIC16.86■□□□□ 0.29
CASD1Q96PB1 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.86■□□□□ 0.29
CASD1Q96PB1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.86■□□□□ 0.29
CASD1Q96PB1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CASD1Q96PB1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASD1Q96PB1 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.86■□□□□ 0.29
CASD1Q96PB1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CASD1Q96PB1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CASD1Q96PB1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms