Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 RPSAP52-203ENST00000622976 1023 ntBASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 AL118508.1-201ENST00000613502 2345 ntBASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 AC005052.1-201ENST00000625181 2492 ntBASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 CYP4F24P-201ENST00000586049 1580 ntBASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC46A1Q96NT5 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 AL136982.4-201ENST00000437689 1740 ntBASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 KLF2P4-201ENST00000451959 1225 ntBASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 Z97205.2-201ENST00000564697 1639 ntBASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 KRT8P22-201ENST00000562317 1415 ntBASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC46A1Q96NT5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 AL442647.2-201ENST00000429864 857 ntBASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 CTBP2P5-201ENST00000454986 1264 ntBASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms