Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 AC003101.2-201ENST00000612557 442 ntBASIC19.03■□□□□ 0.64
DDX11Q96FC9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX11Q96FC9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.03■□□□□ 0.64
DDX11Q96FC9 AC069224.1-201ENST00000566372 1715 ntBASIC19.03■□□□□ 0.64
DDX11Q96FC9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.02■□□□□ 0.64
DDX11Q96FC9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
DDX11Q96FC9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.02■□□□□ 0.64
DDX11Q96FC9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX11Q96FC9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX11Q96FC9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.02■□□□□ 0.64
DDX11Q96FC9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX11Q96FC9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
DDX11Q96FC9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX11Q96FC9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX11Q96FC9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.02■□□□□ 0.64
DDX11Q96FC9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX11Q96FC9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.02■□□□□ 0.64
DDX11Q96FC9 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.02■□□□□ 0.64
DDX11Q96FC9 AC015922.1-201ENST00000421102 1152 ntBASIC19.02■□□□□ 0.64
DDX11Q96FC9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.02■□□□□ 0.64
DDX11Q96FC9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.02■□□□□ 0.64
DDX11Q96FC9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX11Q96FC9 RARRES2P9-201ENST00000565168 469 ntBASIC19.02■□□□□ 0.64
DDX11Q96FC9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.64
DDX11Q96FC9 LINC02560-201ENST00000596379 459 ntBASIC19.02■□□□□ 0.64
DDX11Q96FC9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.02■□□□□ 0.64
DDX11Q96FC9 AC018529.1-201ENST00000613063 361 ntBASIC19.02■□□□□ 0.64
DDX11Q96FC9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX11Q96FC9 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX11Q96FC9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX11Q96FC9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
DDX11Q96FC9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
DDX11Q96FC9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DDX11Q96FC9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 MIR661-201ENST00000384842 89 ntBASIC19.01■□□□□ 0.63
DDX11Q96FC9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 AC142381.1-201ENST00000426099 345 ntBASIC19.01■□□□□ 0.63
DDX11Q96FC9 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 FAM207CP-201ENST00000443486 507 ntBASIC19.01■□□□□ 0.63
DDX11Q96FC9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 AC027369.6-201ENST00000525520 931 ntBASIC19.01■□□□□ 0.63
DDX11Q96FC9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 AF228730.6-201ENST00000641497 218 ntBASIC19.01■□□□□ 0.63
DDX11Q96FC9 AC084121.3-201ENST00000641716 218 ntBASIC19.01■□□□□ 0.63
DDX11Q96FC9 AC105233.6-201ENST00000642093 218 ntBASIC19.01■□□□□ 0.63
DDX11Q96FC9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 AP3S2-216ENST00000617003 1561 ntBASIC19.01■□□□□ 0.63
DDX11Q96FC9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
DDX11Q96FC9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX11Q96FC9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX11Q96FC9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19■□□□□ 0.63
DDX11Q96FC9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms