Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APH1AQ96BI3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
APH1AQ96BI3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
APH1AQ96BI3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APH1AQ96BI3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
APH1AQ96BI3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APH1AQ96BI3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
APH1AQ96BI3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.19□□□□□ -0.14
APH1AQ96BI3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 BNIP3P1-202ENST00000550043 1585 ntBASIC14.18□□□□□ -0.14
APH1AQ96BI3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.18□□□□□ -0.14
APH1AQ96BI3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 AC063926.3-201ENST00000624734 5658 ntBASIC14.18□□□□□ -0.14
APH1AQ96BI3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 FO393414.2-201ENST00000405153 598 ntBASIC14.18□□□□□ -0.14
APH1AQ96BI3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.18□□□□□ -0.14
APH1AQ96BI3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.18□□□□□ -0.14
APH1AQ96BI3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APH1AQ96BI3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APH1AQ96BI3 AC087499.5-201ENST00000452760 1342 ntBASIC14.17□□□□□ -0.14
APH1AQ96BI3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APH1AQ96BI3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
APH1AQ96BI3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APH1AQ96BI3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APH1AQ96BI3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APH1AQ96BI3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APH1AQ96BI3 HMGN1P19-201ENST00000436976 333 ntBASIC14.17□□□□□ -0.14
APH1AQ96BI3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 AL033527.5-202ENST00000641632 1098 ntBASIC14.17□□□□□ -0.14
APH1AQ96BI3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
APH1AQ96BI3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.17□□□□□ -0.14
APH1AQ96BI3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APH1AQ96BI3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APH1AQ96BI3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APH1AQ96BI3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms