Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 KRT8P12-202ENST00000472924 1397 ntBASIC14.39□□□□□ -0.11
CPNE4Q96A23 AL136982.4-201ENST00000437689 1740 ntBASIC14.39□□□□□ -0.11
CPNE4Q96A23 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 AC092580.3-201ENST00000430932 139 ntBASIC14.39□□□□□ -0.11
CPNE4Q96A23 AC241585.1-201ENST00000433527 519 ntBASIC14.39□□□□□ -0.11
CPNE4Q96A23 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 AC093214.1-201ENST00000511688 1107 ntBASIC14.39□□□□□ -0.11
CPNE4Q96A23 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 AL390754.1-201ENST00000619088 582 ntBASIC14.39□□□□□ -0.11
CPNE4Q96A23 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CPNE4Q96A23 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 AC126755.1-201ENST00000525846 6405 ntBASIC14.39□□□□□ -0.11
CPNE4Q96A23 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE4Q96A23 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.38□□□□□ -0.11
CPNE4Q96A23 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 AL080243.2-201ENST00000418783 582 ntBASIC14.38□□□□□ -0.11
CPNE4Q96A23 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 AC005498.2-205ENST00000593218 784 ntBASIC14.38□□□□□ -0.11
CPNE4Q96A23 AC011467.4-201ENST00000594891 528 ntBASIC14.38□□□□□ -0.11
CPNE4Q96A23 TEX28P1-201ENST00000613479 1221 ntBASIC14.38□□□□□ -0.11
CPNE4Q96A23 TEX28P2-201ENST00000617764 1221 ntBASIC14.38□□□□□ -0.11
CPNE4Q96A23 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 AC100757.3-201ENST00000622361 1406 ntBASIC14.38□□□□□ -0.11
CPNE4Q96A23 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE4Q96A23 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CPNE4Q96A23 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.37□□□□□ -0.11
CPNE4Q96A23 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE4Q96A23 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms