Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 AC107890.1-201ENST00000422478 521 ntBASIC14.04□□□□□ -0.16
TMEM54Q969K7 SERBP1P3-201ENST00000459980 809 ntBASIC14.04□□□□□ -0.16
TMEM54Q969K7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 AC069120.2-201ENST00000524091 540 ntBASIC14.04□□□□□ -0.16
TMEM54Q969K7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 GPALPP1-207ENST00000611650 899 ntBASIC14.04□□□□□ -0.16
TMEM54Q969K7 AL138828.2-201ENST00000615812 383 ntBASIC14.04□□□□□ -0.16
TMEM54Q969K7 MIR6069-201ENST00000620069 79 ntBASIC14.04□□□□□ -0.16
TMEM54Q969K7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 AC073592.8-201ENST00000624126 511 ntBASIC14.04□□□□□ -0.16
TMEM54Q969K7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 AL607033.1-201ENST00000623900 1599 ntBASIC14.04□□□□□ -0.16
TMEM54Q969K7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 CICP13-201ENST00000422015 2789 ntBASIC14.04□□□□□ -0.16
TMEM54Q969K7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TMEM54Q969K7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM54Q969K7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 AP003680.1-201ENST00000598970 3660 ntBASIC14.03□□□□□ -0.16
TMEM54Q969K7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 FAM86GP-201ENST00000448322 971 ntBASIC14.03□□□□□ -0.16
TMEM54Q969K7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 TEX28P1-201ENST00000613479 1221 ntBASIC14.03□□□□□ -0.16
TMEM54Q969K7 TEX28P2-201ENST00000617764 1221 ntBASIC14.03□□□□□ -0.16
TMEM54Q969K7 AL033527.5-202ENST00000641632 1098 ntBASIC14.03□□□□□ -0.16
TMEM54Q969K7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM54Q969K7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TMEM54Q969K7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM54Q969K7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
TMEM54Q969K7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM54Q969K7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms