Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF4Q92544 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.15■□□□□ 0.02
TM9SF4Q92544 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.15■□□□□ 0.02
TM9SF4Q92544 MTND6P24-201ENST00000440466 518 ntBASIC15.15■□□□□ 0.02
TM9SF4Q92544 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.15■□□□□ 0.02
TM9SF4Q92544 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.15■□□□□ 0.02
TM9SF4Q92544 AC104640.1-201ENST00000562617 2109 ntBASIC15.15■□□□□ 0.02
TM9SF4Q92544 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.15■□□□□ 0.02
TM9SF4Q92544 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF4Q92544 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.15■□□□□ 0.02
TM9SF4Q92544 AL589739.1-201ENST00000607720 493 ntBASIC15.15■□□□□ 0.02
TM9SF4Q92544 AL662799.1-202ENST00000614205 422 ntBASIC15.15■□□□□ 0.02
TM9SF4Q92544 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.15■□□□□ 0.02
TM9SF4Q92544 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF4Q92544 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TM9SF4Q92544 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF4Q92544 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF4Q92544 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF4Q92544 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TM9SF4Q92544 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF4Q92544 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TM9SF4Q92544 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TM9SF4Q92544 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 TSSK5P-201ENST00000423978 907 ntBASIC15.14■□□□□ 0.01
TM9SF4Q92544 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 RNA5SP410-201ENST00000516285 106 ntBASIC15.14■□□□□ 0.01
TM9SF4Q92544 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 AC013467.2-201ENST00000605472 835 ntBASIC15.14■□□□□ 0.01
TM9SF4Q92544 AC025048.6-201ENST00000634326 1161 ntBASIC15.14■□□□□ 0.01
TM9SF4Q92544 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 AC087499.5-201ENST00000452760 1342 ntBASIC15.14■□□□□ 0.01
TM9SF4Q92544 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.14■□□□□ 0.01
TM9SF4Q92544 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM9SF4Q92544 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF4Q92544 AC073439.1-201ENST00000624121 1774 ntBASIC15.13■□□□□ 0.01
TM9SF4Q92544 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TM9SF4Q92544 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF4Q92544 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF4Q92544 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF4Q92544 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF4Q92544 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF4Q92544 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF4Q92544 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF4Q92544 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.13■□□□□ 0.01
TM9SF4Q92544 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF4Q92544 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TM9SF4Q92544 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF4Q92544 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF4Q92544 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF4Q92544 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.13■□□□□ 0.01
TM9SF4Q92544 KRT17P7-201ENST00000451704 1104 ntBASIC15.13■□□□□ 0.01
TM9SF4Q92544 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF4Q92544 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.13■□□□□ 0.01
TM9SF4Q92544 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF4Q92544 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.13■□□□□ 0.01
TM9SF4Q92544 AC006538.1-201ENST00000567905 1585 ntBASIC15.13■□□□□ 0.01
TM9SF4Q92544 SPDYE22P-201ENST00000582158 798 ntBASIC15.13■□□□□ 0.01
TM9SF4Q92544 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF4Q92544 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.13■□□□□ 0.01
TM9SF4Q92544 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TM9SF4Q92544 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TM9SF4Q92544 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TM9SF4Q92544 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM9SF4Q92544 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms