Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC20.78■□□□□ 0.92
RAPGEF4Q8WZA2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 AC020907.1-201ENST00000616460 1350 ntBASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 AC108725.1-201ENST00000495472 409 ntBASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 AC026410.3-201ENST00000514280 936 ntBASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 AGER-214ENST00000538695 487 ntTSL 2 BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 KRT90P-201ENST00000549264 1064 ntBASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 AC010328.2-201ENST00000597698 1111 ntBASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
RAPGEF4Q8WZA2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
RAPGEF4Q8WZA2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.91
RAPGEF4Q8WZA2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
RAPGEF4Q8WZA2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAPGEF4Q8WZA2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAPGEF4Q8WZA2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 AC026954.1-201ENST00000429771 1293 ntBASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 RHOXF1P1-202ENST00000635473 501 ntBASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 DRD5P1-201ENST00000456605 1438 ntBASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAPGEF4Q8WZA2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 ACKR1-201ENST00000368121 1240 ntBASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 AC245100.3-201ENST00000441281 285 ntBASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 PFN1P12-201ENST00000455938 534 ntBASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 AC022137.2-201ENST00000503482 481 ntBASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20.75■□□□□ 0.91
RAPGEF4Q8WZA2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 C2orf27AP3-201ENST00000434123 579 ntBASIC20.74■□□□□ 0.91
RAPGEF4Q8WZA2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms