Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCNB3Q8WWL7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC24.34■■□□□ 1.49
CCNB3Q8WWL7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC24.34■■□□□ 1.49
CCNB3Q8WWL7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCNB3Q8WWL7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCNB3Q8WWL7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CCNB3Q8WWL7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 AL391005.1-201ENST00000623953 2435 ntBASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 AC112504.1-201ENST00000623415 1841 ntBASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 AC005229.1-201ENST00000392885 409 ntBASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 AC099336.1-201ENST00000417053 1171 ntBASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 VDAC1P7-201ENST00000462417 847 ntBASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 AC097359.3-201ENST00000603982 1210 ntBASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC24.33■■□□□ 1.49
CCNB3Q8WWL7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
CCNB3Q8WWL7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CCNB3Q8WWL7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CCNB3Q8WWL7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CCNB3Q8WWL7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
CCNB3Q8WWL7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 KLF2P4-201ENST00000451959 1225 ntBASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 RPL13AP25-201ENST00000484130 612 ntBASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 ENPP7P5-201ENST00000541031 1031 ntBASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 MIR4525-201ENST00000580000 75 ntBASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 AC026691.1-201ENST00000602502 2017 ntBASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCNB3Q8WWL7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 AP001889.1-201ENST00000525414 633 ntBASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 AC000095.1-201ENST00000603208 874 ntBASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 AC018892.3-201ENST00000623986 2499 ntBASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCNB3Q8WWL7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC24.3■■□□□ 1.48
CCNB3Q8WWL7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCNB3Q8WWL7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC24.3■■□□□ 1.48
CCNB3Q8WWL7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CCNB3Q8WWL7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms