Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 SSR4P1-203ENST00000599569 2260 ntBASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCC2Q8TAQ2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.71■□□□□ 0.58
SMARCC2Q8TAQ2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.58
SMARCC2Q8TAQ2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SMARCC2Q8TAQ2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SMARCC2Q8TAQ2 AC073347.1-201ENST00000421633 2643 ntBASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 CICP13-201ENST00000422015 2789 ntBASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 AL353705.2-201ENST00000428243 662 ntBASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 AC140878.1-201ENST00000565277 250 ntBASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCC2Q8TAQ2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 LINC00554-201ENST00000564841 3011 ntBASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 AC018892.3-201ENST00000623986 2499 ntBASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMARCC2Q8TAQ2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCC2Q8TAQ2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms