Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 DFFBP1-201ENST00000433250 979 ntBASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 AC017007.3-201ENST00000479865 435 ntBASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PHTF2Q8N3S3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 CU639417.3-201ENST00000624240 1404 ntBASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 AL139010.1-201ENST00000454878 894 ntBASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 DOC2GP-202ENST00000514950 1163 ntBASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 LINC01144-201ENST00000626198 1710 ntBASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 AC005622.1-201ENST00000636801 1703 ntBASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHTF2Q8N3S3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms