Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
NPAS3Q8IXF0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.46■□□□□ 0.23
NPAS3Q8IXF0 AC124067.4-201ENST00000519691 2379 ntBASIC16.46■□□□□ 0.23
NPAS3Q8IXF0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.46■□□□□ 0.23
NPAS3Q8IXF0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NPAS3Q8IXF0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS3Q8IXF0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS3Q8IXF0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS3Q8IXF0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.46■□□□□ 0.23
NPAS3Q8IXF0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.46■□□□□ 0.23
NPAS3Q8IXF0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPAS3Q8IXF0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPAS3Q8IXF0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NPAS3Q8IXF0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPAS3Q8IXF0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 RPL7P3-201ENST00000441388 714 ntBASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 CSF2RBP1-201ENST00000447905 391 ntBASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 RN7SL219P-201ENST00000582872 296 ntBASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 TUBB1P2-201ENST00000422712 1306 ntBASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 TUBB1P1-201ENST00000503144 1300 ntBASIC16.45■□□□□ 0.22
NPAS3Q8IXF0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 AP001282.1-201ENST00000531301 1499 ntBASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 C1QBPP1-201ENST00000400117 770 ntBASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 FO681548.1-201ENST00000455617 1132 ntBASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 VDAC1P7-201ENST00000462417 847 ntBASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 AC005052.1-201ENST00000625181 2492 ntBASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS3Q8IXF0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms