Protein–RNA interactions for Protein: Q8IV31

TMEM139, Transmembrane protein 139, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139Q8IV31 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM139Q8IV31 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 FAM197Y8-203ENST00000450145 560 ntBASIC17.15■□□□□ 0.34
TMEM139Q8IV31 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 AC096734.2-201ENST00000562054 433 ntBASIC17.15■□□□□ 0.34
TMEM139Q8IV31 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 FAM215A-202ENST00000632077 792 ntBASIC17.15■□□□□ 0.34
TMEM139Q8IV31 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM139Q8IV31 AC041040.2-201ENST00000622926 2899 ntBASIC17.14■□□□□ 0.34
TMEM139Q8IV31 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
TMEM139Q8IV31 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 AL136982.4-201ENST00000437689 1740 ntBASIC17.14■□□□□ 0.33
TMEM139Q8IV31 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 UNC93B7-201ENST00000509439 705 ntBASIC17.14■□□□□ 0.33
TMEM139Q8IV31 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 AL445228.2-201ENST00000605589 952 ntBASIC17.14■□□□□ 0.33
TMEM139Q8IV31 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.14■□□□□ 0.33
TMEM139Q8IV31 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.14■□□□□ 0.33
TMEM139Q8IV31 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM139Q8IV31 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms