Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 CTBP2P5-201ENST00000454986 1264 ntBASIC16.97■□□□□ 0.31
RNF135Q8IUD6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.97■□□□□ 0.31
RNF135Q8IUD6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.97■□□□□ 0.31
RNF135Q8IUD6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
RNF135Q8IUD6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 AC018695.7-201ENST00000624587 2492 ntBASIC16.96■□□□□ 0.31
RNF135Q8IUD6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 GOLGA2P4-201ENST00000441462 777 ntBASIC16.96■□□□□ 0.31
RNF135Q8IUD6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 AL033527.5-202ENST00000641632 1098 ntBASIC16.96■□□□□ 0.31
RNF135Q8IUD6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RNF135Q8IUD6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF135Q8IUD6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.96■□□□□ 0.3
RNF135Q8IUD6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF135Q8IUD6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
RNF135Q8IUD6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms