Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 AC074044.1-201ENST00000609673 707 ntBASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3CQ6NXT2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 MEP1AP4-201ENST00000423244 1087 ntBASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 KRT8P37-201ENST00000451609 1420 ntBASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 Z97205.2-201ENST00000564697 1639 ntBASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 AL035252.4-201ENST00000624174 288 ntBASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3CQ6NXT2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 SLC7A15P-201ENST00000424028 1363 ntBASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 AC092171.3-201ENST00000610122 2651 ntBASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 NME2P1-201ENST00000426182 414 ntBASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms