Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 AC097359.3-201ENST00000603982 1210 ntBASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 AC018695.7-201ENST00000624587 2492 ntBASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.74■□□□□ 0.43
SWSAP1Q6NVH7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 AC136604.1-201ENST00000418535 575 ntBASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 AC098850.1-201ENST00000419919 790 ntBASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 MYCLP2-201ENST00000449268 967 ntBASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 AC123567.1-201ENST00000548294 1261 ntBASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 RARRES2P5-201ENST00000564013 466 ntBASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 AC099568.2-201ENST00000609194 695 ntBASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 AL607033.1-201ENST00000623900 1599 ntBASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SWSAP1Q6NVH7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 AC069224.1-201ENST00000566372 1715 ntBASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 LINC02199-201ENST00000506655 2702 ntBASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 AC138969.3-201ENST00000546612 1459 ntBASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 AC138932.2-201ENST00000548268 1459 ntBASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 AC126755.4-201ENST00000549796 1459 ntBASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 COX5BP8-201ENST00000416911 349 ntBASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 WASH4P-201ENST00000564273 1246 ntBASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 MIR8072-201ENST00000614241 80 ntBASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SWSAP1Q6NVH7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms