Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 OR7E47P-204ENST00000575924 449 ntBASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 AL645728.2-201ENST00000641974 660 ntBASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 SNX18-202ENST00000343017 3140 ntBASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 OR2I1P-209ENST00000641730 5365 ntBASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 ILF3-AS1-201ENST00000591501 1983 ntBASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 AC134407.2-201ENST00000625089 1978 ntBASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 HS6ST1P1-201ENST00000481504 1234 ntBASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 OR7E14P-202ENST00000530490 1290 ntBASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 AL031432.2-201ENST00000566714 459 ntBASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 AL928711.1-201ENST00000570165 459 ntBASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 MIR4321-201ENST00000592276 80 ntBASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00242Q5T6M2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms