Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.59■□□□□ 0.25
EFEMP1Q12805 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 AC018892.3-201ENST00000623986 2499 ntBASIC16.59■□□□□ 0.25
EFEMP1Q12805 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 SPDYE19P-201ENST00000338590 713 ntBASIC16.59■□□□□ 0.25
EFEMP1Q12805 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 COX20P2-201ENST00000452636 358 ntBASIC16.59■□□□□ 0.25
EFEMP1Q12805 PHKG1P2-201ENST00000457537 863 ntBASIC16.59■□□□□ 0.25
EFEMP1Q12805 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 DOC2GP-202ENST00000514950 1163 ntBASIC16.59■□□□□ 0.25
EFEMP1Q12805 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 AL450472.2-201ENST00000603663 1156 ntBASIC16.59■□□□□ 0.25
EFEMP1Q12805 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.59■□□□□ 0.25
EFEMP1Q12805 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.59■□□□□ 0.25
EFEMP1Q12805 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EFEMP1Q12805 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.58■□□□□ 0.25
EFEMP1Q12805 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.58■□□□□ 0.25
EFEMP1Q12805 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.58■□□□□ 0.25
EFEMP1Q12805 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
EFEMP1Q12805 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EFEMP1Q12805 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EFEMP1Q12805 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
EFEMP1Q12805 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EFEMP1Q12805 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EFEMP1Q12805 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
EFEMP1Q12805 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EFEMP1Q12805 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
EFEMP1Q12805 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EFEMP1Q12805 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
EFEMP1Q12805 PIN1P1-201ENST00000412108 996 ntBASIC16.58■□□□□ 0.24
EFEMP1Q12805 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.58■□□□□ 0.24
EFEMP1Q12805 AL589987.1-201ENST00000453380 819 ntBASIC16.58■□□□□ 0.24
EFEMP1Q12805 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.58■□□□□ 0.24
EFEMP1Q12805 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
EFEMP1Q12805 SRD5A3P1-201ENST00000603021 949 ntBASIC16.58■□□□□ 0.24
EFEMP1Q12805 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
EFEMP1Q12805 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EFEMP1Q12805 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
EFEMP1Q12805 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EFEMP1Q12805 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
EFEMP1Q12805 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EFEMP1Q12805 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EFEMP1Q12805 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
EFEMP1Q12805 AP003680.1-201ENST00000598970 3660 ntBASIC16.57■□□□□ 0.24
EFEMP1Q12805 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
EFEMP1Q12805 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EFEMP1Q12805 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.57■□□□□ 0.24
EFEMP1Q12805 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.57■□□□□ 0.24
EFEMP1Q12805 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.57■□□□□ 0.24
EFEMP1Q12805 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.57■□□□□ 0.24
EFEMP1Q12805 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.57■□□□□ 0.24
EFEMP1Q12805 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EFEMP1Q12805 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EFEMP1Q12805 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EFEMP1Q12805 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.57■□□□□ 0.24
EFEMP1Q12805 AC007541.1-201ENST00000570282 1469 ntBASIC16.57■□□□□ 0.24
EFEMP1Q12805 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.57■□□□□ 0.24
EFEMP1Q12805 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.57■□□□□ 0.24
EFEMP1Q12805 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EFEMP1Q12805 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.57■□□□□ 0.24
EFEMP1Q12805 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
EFEMP1Q12805 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms