Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SCN1BQ07699 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SCN1BQ07699 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.34□□□□□ -0.11
SCN1BQ07699 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.34□□□□□ -0.11
SCN1BQ07699 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.34□□□□□ -0.11
SCN1BQ07699 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SCN1BQ07699 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.34□□□□□ -0.11
SCN1BQ07699 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.34□□□□□ -0.11
SCN1BQ07699 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.34□□□□□ -0.11
SCN1BQ07699 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.34□□□□□ -0.11
SCN1BQ07699 KRT18P31-201ENST00000506277 1292 ntBASIC14.34□□□□□ -0.11
SCN1BQ07699 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.34□□□□□ -0.11
SCN1BQ07699 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.34□□□□□ -0.11
SCN1BQ07699 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.34□□□□□ -0.11
SCN1BQ07699 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.34□□□□□ -0.11
SCN1BQ07699 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.34□□□□□ -0.11
SCN1BQ07699 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.34□□□□□ -0.11
SCN1BQ07699 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.34□□□□□ -0.11
SCN1BQ07699 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
SCN1BQ07699 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SCN1BQ07699 AC073592.4-201ENST00000623827 446 ntBASIC14.34□□□□□ -0.11
SCN1BQ07699 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.34□□□□□ -0.11
SCN1BQ07699 AL022326.1-202ENST00000641533 845 ntBASIC14.34□□□□□ -0.11
SCN1BQ07699 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SCN1BQ07699 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.34□□□□□ -0.11
SCN1BQ07699 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.34□□□□□ -0.11
SCN1BQ07699 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SCN1BQ07699 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN1BQ07699 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SCN1BQ07699 AC013726.1-201ENST00000563747 2285 ntBASIC14.34□□□□□ -0.11
SCN1BQ07699 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SCN1BQ07699 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SCN1BQ07699 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCN1BQ07699 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.33□□□□□ -0.11
SCN1BQ07699 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCN1BQ07699 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
SCN1BQ07699 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.33□□□□□ -0.11
SCN1BQ07699 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SCN1BQ07699 KRT8P49-201ENST00000604166 1432 ntBASIC14.33□□□□□ -0.11
SCN1BQ07699 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.33□□□□□ -0.11
SCN1BQ07699 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.33□□□□□ -0.11
SCN1BQ07699 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCN1BQ07699 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
SCN1BQ07699 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SCN1BQ07699 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.33□□□□□ -0.11
SCN1BQ07699 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.33□□□□□ -0.12
SCN1BQ07699 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 AC007686.3-201ENST00000619017 3487 ntBASIC14.33□□□□□ -0.12
SCN1BQ07699 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SCN1BQ07699 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.33□□□□□ -0.12
SCN1BQ07699 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
SCN1BQ07699 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.33□□□□□ -0.12
SCN1BQ07699 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
SCN1BQ07699 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.33□□□□□ -0.12
SCN1BQ07699 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.33□□□□□ -0.12
SCN1BQ07699 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.33□□□□□ -0.12
SCN1BQ07699 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SCN1BQ07699 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.33□□□□□ -0.12
SCN1BQ07699 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.33□□□□□ -0.12
SCN1BQ07699 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SCN1BQ07699 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.33□□□□□ -0.12
SCN1BQ07699 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
SCN1BQ07699 AC243591.1-201ENST00000452967 1364 ntBASIC14.33□□□□□ -0.12
SCN1BQ07699 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SCN1BQ07699 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SCN1BQ07699 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SCN1BQ07699 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.33□□□□□ -0.12
SCN1BQ07699 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN1BQ07699 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCN1BQ07699 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCN1BQ07699 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCN1BQ07699 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.32□□□□□ -0.12
SCN1BQ07699 AL137784.3-201ENST00000623858 2288 ntBASIC14.32□□□□□ -0.12
SCN1BQ07699 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms