Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN7AQ01118 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN7AQ01118 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SCN7AQ01118 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN7AQ01118 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN7AQ01118 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN7AQ01118 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SCN7AQ01118 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.48■□□□□ 0.71
SCN7AQ01118 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN7AQ01118 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN7AQ01118 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN7AQ01118 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SCN7AQ01118 AC025181.2-201ENST00000606994 802 ntBASIC19.48■□□□□ 0.71
SCN7AQ01118 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN7AQ01118 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN7AQ01118 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN7AQ01118 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.48■□□□□ 0.71
SCN7AQ01118 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN7AQ01118 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SCN7AQ01118 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN7AQ01118 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
SCN7AQ01118 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.47■□□□□ 0.71
SCN7AQ01118 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.47■□□□□ 0.71
SCN7AQ01118 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN7AQ01118 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.47■□□□□ 0.71
SCN7AQ01118 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.47■□□□□ 0.71
SCN7AQ01118 AC005730.2-201ENST00000564549 1184 ntBASIC19.47■□□□□ 0.71
SCN7AQ01118 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN7AQ01118 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN7AQ01118 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.47■□□□□ 0.71
SCN7AQ01118 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.47■□□□□ 0.71
SCN7AQ01118 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SCN7AQ01118 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.47■□□□□ 0.71
SCN7AQ01118 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN7AQ01118 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.46■□□□□ 0.71
SCN7AQ01118 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.46■□□□□ 0.71
SCN7AQ01118 PRSS30P-206ENST00000641773 873 ntBASIC19.46■□□□□ 0.71
SCN7AQ01118 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN7AQ01118 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.46■□□□□ 0.71
SCN7AQ01118 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 AC015818.8-201ENST00000587907 1519 ntBASIC19.46■□□□□ 0.71
SCN7AQ01118 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SCN7AQ01118 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SCN7AQ01118 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SCN7AQ01118 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 AL139094.1-201ENST00000405549 1188 ntBASIC19.46■□□□□ 0.71
SCN7AQ01118 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN7AQ01118 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.46■□□□□ 0.71
SCN7AQ01118 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN7AQ01118 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN7AQ01118 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.7
SCN7AQ01118 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN7AQ01118 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN7AQ01118 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN7AQ01118 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN7AQ01118 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN7AQ01118 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCN7AQ01118 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCN7AQ01118 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN7AQ01118 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN7AQ01118 AC092506.1-202ENST00000401022 528 ntBASIC19.45■□□□□ 0.7
SCN7AQ01118 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN7AQ01118 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN7AQ01118 RN7SL713P-201ENST00000582127 302 ntBASIC19.45■□□□□ 0.7
SCN7AQ01118 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN7AQ01118 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SCN7AQ01118 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN7AQ01118 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN7AQ01118 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN7AQ01118 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms