Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
IRX3P78415 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX3P78415 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX3P78415 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX3P78415 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX3P78415 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.64■□□□□ 0.57
IRX3P78415 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
IRX3P78415 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.63■□□□□ 0.57
IRX3P78415 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
IRX3P78415 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 NKILA-202ENST00000614771 2598 ntBASIC18.63■□□□□ 0.57
IRX3P78415 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
IRX3P78415 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.63■□□□□ 0.57
IRX3P78415 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
IRX3P78415 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.63■□□□□ 0.57
IRX3P78415 HIST3H2BA-201ENST00000436555 524 ntBASIC18.63■□□□□ 0.57
IRX3P78415 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.63■□□□□ 0.57
IRX3P78415 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.63■□□□□ 0.57
IRX3P78415 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.63■□□□□ 0.57
IRX3P78415 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.63■□□□□ 0.57
IRX3P78415 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.63■□□□□ 0.57
IRX3P78415 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.63■□□□□ 0.57
IRX3P78415 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.63■□□□□ 0.57
IRX3P78415 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
IRX3P78415 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
IRX3P78415 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.63■□□□□ 0.57
IRX3P78415 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 AC011676.5-201ENST00000624864 2660 ntBASIC18.63■□□□□ 0.57
IRX3P78415 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
IRX3P78415 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX3P78415 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
IRX3P78415 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
IRX3P78415 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
IRX3P78415 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.62■□□□□ 0.57
IRX3P78415 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
IRX3P78415 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.62■□□□□ 0.57
IRX3P78415 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.62■□□□□ 0.57
IRX3P78415 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.62■□□□□ 0.57
IRX3P78415 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.62■□□□□ 0.57
IRX3P78415 AC015936.2-201ENST00000593177 259 ntBASIC18.62■□□□□ 0.57
IRX3P78415 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.62■□□□□ 0.57
IRX3P78415 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.62■□□□□ 0.57
IRX3P78415 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.62■□□□□ 0.57
IRX3P78415 CDC14C-201ENST00000428251 1719 ntBASIC18.62■□□□□ 0.57
IRX3P78415 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
IRX3P78415 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
IRX3P78415 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.62■□□□□ 0.57
IRX3P78415 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX3P78415 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.61■□□□□ 0.57
IRX3P78415 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
IRX3P78415 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
IRX3P78415 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.61■□□□□ 0.57
IRX3P78415 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
IRX3P78415 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.61■□□□□ 0.57
IRX3P78415 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
IRX3P78415 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.61■□□□□ 0.57
IRX3P78415 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms