Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
UBE2NP61088 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
UBE2NP61088 MTHFR-217ENST00000641820 1569 ntBASIC14.1□□□□□ -0.15
UBE2NP61088 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
UBE2NP61088 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.1□□□□□ -0.15
UBE2NP61088 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 MIR770-201ENST00000390219 98 ntBASIC14.1□□□□□ -0.15
UBE2NP61088 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.1□□□□□ -0.15
UBE2NP61088 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.1□□□□□ -0.15
UBE2NP61088 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.1□□□□□ -0.15
UBE2NP61088 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.1□□□□□ -0.15
UBE2NP61088 HLA-V-204ENST00000476601 1289 ntBASIC14.1□□□□□ -0.15
UBE2NP61088 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 AC093214.1-201ENST00000511688 1107 ntBASIC14.1□□□□□ -0.15
UBE2NP61088 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.1□□□□□ -0.15
UBE2NP61088 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.1□□□□□ -0.15
UBE2NP61088 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.1□□□□□ -0.15
UBE2NP61088 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.1□□□□□ -0.15
UBE2NP61088 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.1□□□□□ -0.15
UBE2NP61088 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.1□□□□□ -0.15
UBE2NP61088 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.1□□□□□ -0.15
UBE2NP61088 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
UBE2NP61088 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 AL596087.1-201ENST00000400979 1969 ntBASIC14.1□□□□□ -0.15
UBE2NP61088 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
UBE2NP61088 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
UBE2NP61088 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.1□□□□□ -0.15
UBE2NP61088 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
UBE2NP61088 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
UBE2NP61088 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2NP61088 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UBE2NP61088 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2NP61088 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
UBE2NP61088 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2NP61088 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2NP61088 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2NP61088 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2NP61088 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2NP61088 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.09□□□□□ -0.15
UBE2NP61088 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2NP61088 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
UBE2NP61088 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2NP61088 AC055876.3-201ENST00000431496 288 ntBASIC14.09□□□□□ -0.15
UBE2NP61088 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 SERBP1P3-201ENST00000459980 809 ntBASIC14.09□□□□□ -0.15
UBE2NP61088 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.09□□□□□ -0.15
UBE2NP61088 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.09□□□□□ -0.15
UBE2NP61088 AC011467.4-201ENST00000594891 528 ntBASIC14.09□□□□□ -0.15
UBE2NP61088 AC138649.4-201ENST00000612222 287 ntBASIC14.09□□□□□ -0.15
UBE2NP61088 AL390754.1-201ENST00000619088 582 ntBASIC14.09□□□□□ -0.15
UBE2NP61088 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2NP61088 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 AC006449.5-201ENST00000610658 2098 ntBASIC14.09□□□□□ -0.15
UBE2NP61088 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
UBE2NP61088 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2NP61088 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.09□□□□□ -0.15
UBE2NP61088 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 AL161772.1-201ENST00000610494 4412 ntBASIC14.09□□□□□ -0.15
UBE2NP61088 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
UBE2NP61088 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2NP61088 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2NP61088 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms