Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.44□□□□□ -0.1
SUMO3P55854 RFPL4AP1-201ENST00000530883 850 ntBASIC14.44□□□□□ -0.1
SUMO3P55854 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.44□□□□□ -0.1
SUMO3P55854 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.44□□□□□ -0.1
SUMO3P55854 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.44□□□□□ -0.1
SUMO3P55854 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.44□□□□□ -0.1
SUMO3P55854 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.44□□□□□ -0.1
SUMO3P55854 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SUMO3P55854 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SUMO3P55854 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SUMO3P55854 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.44□□□□□ -0.1
SUMO3P55854 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
SUMO3P55854 Z97205.2-201ENST00000564697 1639 ntBASIC14.44□□□□□ -0.1
SUMO3P55854 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SUMO3P55854 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.44□□□□□ -0.1
SUMO3P55854 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SUMO3P55854 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SUMO3P55854 AC008894.3-201ENST00000624324 3103 ntBASIC14.44□□□□□ -0.1
SUMO3P55854 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.43□□□□□ -0.1
SUMO3P55854 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SUMO3P55854 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 AC100757.3-201ENST00000622361 1406 ntBASIC14.43□□□□□ -0.1
SUMO3P55854 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SUMO3P55854 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.43□□□□□ -0.1
SUMO3P55854 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.43□□□□□ -0.1
SUMO3P55854 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.43□□□□□ -0.1
SUMO3P55854 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
SUMO3P55854 SDHAP3-202ENST00000515467 728 ntBASIC14.43□□□□□ -0.1
SUMO3P55854 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SUMO3P55854 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 AC010336.2-201ENST00000564226 506 ntBASIC14.43□□□□□ -0.1
SUMO3P55854 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.43□□□□□ -0.1
SUMO3P55854 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.43□□□□□ -0.1
SUMO3P55854 AC025048.3-201ENST00000590609 569 ntBASIC14.43□□□□□ -0.1
SUMO3P55854 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SUMO3P55854 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.43□□□□□ -0.1
SUMO3P55854 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.43□□□□□ -0.1
SUMO3P55854 AC005702.4-201ENST00000618393 416 ntBASIC14.43□□□□□ -0.1
SUMO3P55854 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SUMO3P55854 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.43□□□□□ -0.1
SUMO3P55854 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SUMO3P55854 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMO3P55854 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMO3P55854 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.43□□□□□ -0.1
SUMO3P55854 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.43□□□□□ -0.1
SUMO3P55854 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SUMO3P55854 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SUMO3P55854 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMO3P55854 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms