Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
FOXG1P55316 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXG1P55316 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXG1P55316 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.99□□□□□ -0.17
FOXG1P55316 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
FOXG1P55316 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
FOXG1P55316 AC011477.6-201ENST00000604980 1927 ntBASIC13.99□□□□□ -0.17
FOXG1P55316 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.99□□□□□ -0.17
FOXG1P55316 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
FOXG1P55316 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXG1P55316 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.99□□□□□ -0.17
FOXG1P55316 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
FOXG1P55316 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXG1P55316 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.99□□□□□ -0.17
FOXG1P55316 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FOXG1P55316 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FOXG1P55316 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.99□□□□□ -0.17
FOXG1P55316 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
FOXG1P55316 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXG1P55316 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXG1P55316 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
FOXG1P55316 PAUPAR-201ENST00000630360 2965 ntBASIC13.98□□□□□ -0.17
FOXG1P55316 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
FOXG1P55316 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.98□□□□□ -0.17
FOXG1P55316 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXG1P55316 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXG1P55316 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
FOXG1P55316 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXG1P55316 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
FOXG1P55316 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
FOXG1P55316 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.98□□□□□ -0.17
FOXG1P55316 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXG1P55316 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXG1P55316 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.98□□□□□ -0.17
FOXG1P55316 AC114501.2-201ENST00000439631 535 ntBASIC13.98□□□□□ -0.17
FOXG1P55316 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.98□□□□□ -0.17
FOXG1P55316 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
FOXG1P55316 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.98□□□□□ -0.17
FOXG1P55316 SDHAP3-202ENST00000515467 728 ntBASIC13.98□□□□□ -0.17
FOXG1P55316 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.98□□□□□ -0.17
FOXG1P55316 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.98□□□□□ -0.17
FOXG1P55316 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.98□□□□□ -0.17
FOXG1P55316 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.98□□□□□ -0.17
FOXG1P55316 AC104794.3-201ENST00000566840 1248 ntBASIC13.98□□□□□ -0.17
FOXG1P55316 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.98□□□□□ -0.17
FOXG1P55316 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.98□□□□□ -0.17
FOXG1P55316 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.98□□□□□ -0.17
FOXG1P55316 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.98□□□□□ -0.17
FOXG1P55316 AC008761.3-201ENST00000624803 892 ntBASIC13.98□□□□□ -0.17
FOXG1P55316 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.98□□□□□ -0.17
FOXG1P55316 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.98□□□□□ -0.17
FOXG1P55316 AF228730.6-201ENST00000641497 218 ntBASIC13.98□□□□□ -0.17
FOXG1P55316 AC084121.3-201ENST00000641716 218 ntBASIC13.98□□□□□ -0.17
FOXG1P55316 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.98□□□□□ -0.17
FOXG1P55316 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.98□□□□□ -0.17
FOXG1P55316 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXG1P55316 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.98□□□□□ -0.17
FOXG1P55316 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXG1P55316 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FOXG1P55316 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.98□□□□□ -0.17
FOXG1P55316 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.98□□□□□ -0.17
FOXG1P55316 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXG1P55316 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.98□□□□□ -0.17
FOXG1P55316 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXG1P55316 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.98□□□□□ -0.17
FOXG1P55316 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXG1P55316 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
FOXG1P55316 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.98□□□□□ -0.17
FOXG1P55316 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
FOXG1P55316 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
FOXG1P55316 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXG1P55316 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXG1P55316 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXG1P55316 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
FOXG1P55316 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 AL607033.1-201ENST00000623900 1599 ntBASIC13.97□□□□□ -0.17
FOXG1P55316 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
FOXG1P55316 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
FOXG1P55316 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
FOXG1P55316 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
FOXG1P55316 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.97□□□□□ -0.17
FOXG1P55316 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXG1P55316 KRT18P64-201ENST00000434946 1219 ntBASIC13.97□□□□□ -0.17
FOXG1P55316 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms