Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOC4P55056 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.71□□□□□ -0.54
APOC4P55056 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
APOC4P55056 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.71□□□□□ -0.54
APOC4P55056 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC11.71□□□□□ -0.54
APOC4P55056 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
APOC4P55056 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC4P55056 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC4P55056 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC4P55056 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.71□□□□□ -0.54
APOC4P55056 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC4P55056 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.71□□□□□ -0.54
APOC4P55056 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.71□□□□□ -0.54
APOC4P55056 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
APOC4P55056 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC4P55056 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC4P55056 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.71□□□□□ -0.54
APOC4P55056 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC4P55056 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC4P55056 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
APOC4P55056 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.71□□□□□ -0.54
APOC4P55056 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOC4P55056 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
APOC4P55056 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
APOC4P55056 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
APOC4P55056 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
APOC4P55056 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.7□□□□□ -0.54
APOC4P55056 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
APOC4P55056 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 SPDYE19P-201ENST00000338590 713 ntBASIC11.7□□□□□ -0.54
APOC4P55056 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.7□□□□□ -0.54
APOC4P55056 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.7□□□□□ -0.54
APOC4P55056 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.7□□□□□ -0.54
APOC4P55056 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.7□□□□□ -0.54
APOC4P55056 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.7□□□□□ -0.54
APOC4P55056 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.7□□□□□ -0.54
APOC4P55056 TPRX2P-201ENST00000535362 881 ntBASIC11.7□□□□□ -0.54
APOC4P55056 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.7□□□□□ -0.54
APOC4P55056 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.7□□□□□ -0.54
APOC4P55056 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.7□□□□□ -0.54
APOC4P55056 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.7□□□□□ -0.54
APOC4P55056 AL662799.1-202ENST00000614205 422 ntBASIC11.7□□□□□ -0.54
APOC4P55056 AF228730.6-201ENST00000641497 218 ntBASIC11.7□□□□□ -0.54
APOC4P55056 AC084121.3-201ENST00000641716 218 ntBASIC11.7□□□□□ -0.54
APOC4P55056 AC105233.6-201ENST00000642093 218 ntBASIC11.7□□□□□ -0.54
APOC4P55056 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
APOC4P55056 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
APOC4P55056 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
APOC4P55056 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC4P55056 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
APOC4P55056 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC4P55056 PRORSD1P-202ENST00000563365 2154 ntBASIC11.69□□□□□ -0.54
APOC4P55056 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
APOC4P55056 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
APOC4P55056 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
APOC4P55056 AC020916.1-201ENST00000587762 1774 ntBASIC11.69□□□□□ -0.54
APOC4P55056 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
APOC4P55056 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms