Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CACNB3P54284 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.8■□□□□ 0.6
CACNB3P54284 FTH1P14-201ENST00000482930 551 ntBASIC18.8■□□□□ 0.6
CACNB3P54284 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.8■□□□□ 0.6
CACNB3P54284 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.8■□□□□ 0.6
CACNB3P54284 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.8■□□□□ 0.6
CACNB3P54284 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.8■□□□□ 0.6
CACNB3P54284 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CACNB3P54284 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.8■□□□□ 0.6
CACNB3P54284 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNB3P54284 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CACNB3P54284 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNB3P54284 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.8■□□□□ 0.6
CACNB3P54284 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNB3P54284 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CACNB3P54284 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB3P54284 AL121723.1-201ENST00000445194 1519 ntBASIC18.79■□□□□ 0.6
CACNB3P54284 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CACNB3P54284 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CACNB3P54284 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.79■□□□□ 0.6
CACNB3P54284 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CACNB3P54284 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.79■□□□□ 0.6
CACNB3P54284 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.79■□□□□ 0.6
CACNB3P54284 RPL7P3-201ENST00000441388 714 ntBASIC18.79■□□□□ 0.6
CACNB3P54284 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.79■□□□□ 0.6
CACNB3P54284 AC093433.1-201ENST00000458048 571 ntBASIC18.79■□□□□ 0.6
CACNB3P54284 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CACNB3P54284 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CACNB3P54284 ENPP7P5-201ENST00000541031 1031 ntBASIC18.79■□□□□ 0.6
CACNB3P54284 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.79■□□□□ 0.6
CACNB3P54284 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.79■□□□□ 0.6
CACNB3P54284 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.79■□□□□ 0.6
CACNB3P54284 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CACNB3P54284 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.79■□□□□ 0.6
CACNB3P54284 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.79■□□□□ 0.6
CACNB3P54284 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CACNB3P54284 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNB3P54284 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNB3P54284 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB3P54284 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNB3P54284 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNB3P54284 AC006449.6-201ENST00000612330 2296 ntBASIC18.79■□□□□ 0.6
CACNB3P54284 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CACNB3P54284 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.78■□□□□ 0.6
CACNB3P54284 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNB3P54284 AC007551.1-201ENST00000457394 519 ntBASIC18.78■□□□□ 0.6
CACNB3P54284 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNB3P54284 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNB3P54284 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNB3P54284 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNB3P54284 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNB3P54284 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB3P54284 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CACNB3P54284 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.77■□□□□ 0.6
CACNB3P54284 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CACNB3P54284 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 AC134312.5-201ENST00000568031 1313 ntBASIC18.77■□□□□ 0.6
CACNB3P54284 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 AC018695.7-201ENST00000624587 2492 ntBASIC18.77■□□□□ 0.6
CACNB3P54284 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms