Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RPL13P2-201ENST00000440687 659 ntBASIC17.23■□□□□ 0.35
TNFSF9P41273 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TNFSF9P41273 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFSF9P41273 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFSF9P41273 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.23■□□□□ 0.35
TNFSF9P41273 DOC2GP-202ENST00000514950 1163 ntBASIC17.23■□□□□ 0.35
TNFSF9P41273 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFSF9P41273 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.23■□□□□ 0.35
TNFSF9P41273 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.23■□□□□ 0.35
TNFSF9P41273 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.23■□□□□ 0.35
TNFSF9P41273 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.23■□□□□ 0.35
TNFSF9P41273 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
TNFSF9P41273 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.23■□□□□ 0.35
TNFSF9P41273 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TNFSF9P41273 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TNFSF9P41273 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFSF9P41273 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFSF9P41273 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNFSF9P41273 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFSF9P41273 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFSF9P41273 AC008894.3-201ENST00000624324 3103 ntBASIC17.23■□□□□ 0.35
TNFSF9P41273 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TNFSF9P41273 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFSF9P41273 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.22■□□□□ 0.35
TNFSF9P41273 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFSF9P41273 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFSF9P41273 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TNFSF9P41273 AL365203.3-201ENST00000609742 2057 ntBASIC17.22■□□□□ 0.35
TNFSF9P41273 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.22■□□□□ 0.35
TNFSF9P41273 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFSF9P41273 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TNFSF9P41273 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFSF9P41273 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFSF9P41273 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.22■□□□□ 0.35
TNFSF9P41273 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TNFSF9P41273 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TNFSF9P41273 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFSF9P41273 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TNFSF9P41273 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
TNFSF9P41273 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFSF9P41273 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
TNFSF9P41273 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TNFSF9P41273 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
TNFSF9P41273 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.22■□□□□ 0.35
TNFSF9P41273 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.22■□□□□ 0.35
TNFSF9P41273 AC004233.3-201ENST00000607794 1269 ntBASIC17.22■□□□□ 0.35
TNFSF9P41273 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.22■□□□□ 0.35
TNFSF9P41273 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFSF9P41273 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.22■□□□□ 0.35
TNFSF9P41273 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFSF9P41273 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFSF9P41273 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFSF9P41273 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TNFSF9P41273 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TNFSF9P41273 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.22■□□□□ 0.35
TNFSF9P41273 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TNFSF9P41273 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFSF9P41273 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.21■□□□□ 0.35
TNFSF9P41273 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TNFSF9P41273 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TNFSF9P41273 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFSF9P41273 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF9P41273 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TNFSF9P41273 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF9P41273 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF9P41273 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF9P41273 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF9P41273 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF9P41273 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TNFSF9P41273 AL035633.1-201ENST00000406139 838 ntBASIC17.21■□□□□ 0.35
TNFSF9P41273 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFSF9P41273 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.21■□□□□ 0.35
TNFSF9P41273 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFSF9P41273 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF9P41273 AC023310.3-201ENST00000557027 670 ntBASIC17.21■□□□□ 0.35
TNFSF9P41273 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.21■□□□□ 0.35
TNFSF9P41273 AC100756.1-201ENST00000562736 682 ntBASIC17.21■□□□□ 0.35
TNFSF9P41273 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.21■□□□□ 0.35
TNFSF9P41273 AC138749.3-201ENST00000567691 622 ntBASIC17.21■□□□□ 0.35
TNFSF9P41273 AC092337.1-201ENST00000568699 1129 ntBASIC17.21■□□□□ 0.35
TNFSF9P41273 AL132655.2-201ENST00000596276 594 ntBASIC17.21■□□□□ 0.35
TNFSF9P41273 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF9P41273 AC116165.1-201ENST00000611806 668 ntBASIC17.21■□□□□ 0.35
TNFSF9P41273 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TNFSF9P41273 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TNFSF9P41273 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFSF9P41273 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.21■□□□□ 0.35
TNFSF9P41273 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF9P41273 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TNFSF9P41273 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFSF9P41273 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFSF9P41273 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF9P41273 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF9P41273 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFSF9P41273 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.21■□□□□ 0.35
TNFSF9P41273 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.21■□□□□ 0.35
TNFSF9P41273 CROCCP1-201ENST00000426910 5675 ntBASIC17.21■□□□□ 0.34
TNFSF9P41273 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TNFSF9P41273 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFSF9P41273 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms