Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.02□□□□□ -0.17
GDNFP39905 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.02□□□□□ -0.17
GDNFP39905 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 LINC00528-201ENST00000600723 2160 ntBASIC14.02□□□□□ -0.17
GDNFP39905 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
GDNFP39905 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.02□□□□□ -0.17
GDNFP39905 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.02□□□□□ -0.17
GDNFP39905 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GDNFP39905 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.01□□□□□ -0.17
GDNFP39905 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
GDNFP39905 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.01□□□□□ -0.17
GDNFP39905 AL592424.1-201ENST00000563624 1536 ntBASIC14.01□□□□□ -0.17
GDNFP39905 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
GDNFP39905 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.01□□□□□ -0.17
GDNFP39905 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
GDNFP39905 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.01□□□□□ -0.17
GDNFP39905 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.01□□□□□ -0.17
GDNFP39905 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.01□□□□□ -0.17
GDNFP39905 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.01□□□□□ -0.17
GDNFP39905 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.01□□□□□ -0.17
GDNFP39905 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.01□□□□□ -0.17
GDNFP39905 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
GDNFP39905 FAAHP1-202ENST00000446499 1238 ntBASIC14.01□□□□□ -0.17
GDNFP39905 AF186996.4-201ENST00000467186 377 ntBASIC14.01□□□□□ -0.17
GDNFP39905 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
GDNFP39905 AL160237.2-201ENST00000556165 472 ntBASIC14.01□□□□□ -0.17
GDNFP39905 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.01□□□□□ -0.17
GDNFP39905 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.01□□□□□ -0.17
GDNFP39905 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
GDNFP39905 FAM215A-202ENST00000632077 792 ntBASIC14.01□□□□□ -0.17
GDNFP39905 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
GDNFP39905 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
GDNFP39905 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.01□□□□□ -0.17
GDNFP39905 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.01□□□□□ -0.17
GDNFP39905 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 AC007191.1-201ENST00000623179 2995 ntBASIC14.01□□□□□ -0.17
GDNFP39905 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GDNFP39905 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
GDNFP39905 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14□□□□□ -0.17
GDNFP39905 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
GDNFP39905 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14□□□□□ -0.17
GDNFP39905 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14□□□□□ -0.17
GDNFP39905 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
GDNFP39905 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14□□□□□ -0.17
GDNFP39905 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14□□□□□ -0.17
GDNFP39905 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14□□□□□ -0.17
GDNFP39905 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14□□□□□ -0.17
GDNFP39905 AC026396.1-201ENST00000419388 421 ntBASIC14□□□□□ -0.17
GDNFP39905 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 AC009078.2-202ENST00000463353 338 ntBASIC14□□□□□ -0.17
GDNFP39905 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14□□□□□ -0.17
GDNFP39905 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14□□□□□ -0.17
GDNFP39905 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14□□□□□ -0.17
GDNFP39905 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14□□□□□ -0.17
GDNFP39905 AC006557.2-201ENST00000592985 1240 ntBASIC14□□□□□ -0.17
GDNFP39905 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14□□□□□ -0.17
GDNFP39905 MIR7706-201ENST00000613747 67 ntBASIC14□□□□□ -0.17
GDNFP39905 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
GDNFP39905 AC008735.5-201ENST00000623544 497 ntBASIC14□□□□□ -0.17
GDNFP39905 AC079416.2-201ENST00000625035 1193 ntBASIC14□□□□□ -0.17
GDNFP39905 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDNFP39905 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms