Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.88■□□□□ 0.77
RFC4P35249 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFC4P35249 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RFC4P35249 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.88■□□□□ 0.77
RFC4P35249 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.88■□□□□ 0.77
RFC4P35249 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC4P35249 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RFC4P35249 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RFC4P35249 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
RFC4P35249 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC4P35249 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFC4P35249 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RFC4P35249 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC4P35249 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RFC4P35249 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.87■□□□□ 0.77
RFC4P35249 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC4P35249 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.87■□□□□ 0.77
RFC4P35249 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC4P35249 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.87■□□□□ 0.77
RFC4P35249 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.87■□□□□ 0.77
RFC4P35249 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC4P35249 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC4P35249 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC4P35249 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RFC4P35249 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC4P35249 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC4P35249 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.87■□□□□ 0.77
RFC4P35249 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC4P35249 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFC4P35249 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFC4P35249 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC4P35249 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RFC4P35249 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.86■□□□□ 0.77
RFC4P35249 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RFC4P35249 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.86■□□□□ 0.77
RFC4P35249 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.86■□□□□ 0.77
RFC4P35249 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RFC4P35249 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RFC4P35249 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.86■□□□□ 0.77
RFC4P35249 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 MTX1P1-201ENST00000440904 838 ntBASIC19.86■□□□□ 0.77
RFC4P35249 AC004898.1-201ENST00000451057 766 ntBASIC19.86■□□□□ 0.77
RFC4P35249 HOMER2P2-201ENST00000451621 847 ntBASIC19.86■□□□□ 0.77
RFC4P35249 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.86■□□□□ 0.77
RFC4P35249 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.86■□□□□ 0.77
RFC4P35249 AC104982.3-201ENST00000581995 514 ntBASIC19.86■□□□□ 0.77
RFC4P35249 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RFC4P35249 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RFC4P35249 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RFC4P35249 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RFC4P35249 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC4P35249 AC138028.6-201ENST00000616106 1482 ntBASIC19.86■□□□□ 0.77
RFC4P35249 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RFC4P35249 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.85■□□□□ 0.77
RFC4P35249 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RFC4P35249 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RFC4P35249 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 MIR1202-201ENST00000408529 83 ntBASIC19.85■□□□□ 0.77
RFC4P35249 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
RFC4P35249 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 FNTAP2-201ENST00000430308 634 ntBASIC19.85■□□□□ 0.77
RFC4P35249 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RFC4P35249 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.85■□□□□ 0.77
RFC4P35249 SCARNA20.5-201ENST00000516991 142 ntBASIC19.85■□□□□ 0.77
RFC4P35249 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.85■□□□□ 0.77
RFC4P35249 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.85■□□□□ 0.77
RFC4P35249 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
RFC4P35249 AP006547.1-201ENST00000563435 692 ntBASIC19.85■□□□□ 0.77
RFC4P35249 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.85■□□□□ 0.77
RFC4P35249 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.85■□□□□ 0.77
RFC4P35249 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.85■□□□□ 0.77
RFC4P35249 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms