Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP6P35125 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP6P35125 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
USP6P35125 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC21.22■□□□□ 0.99
USP6P35125 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
USP6P35125 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
USP6P35125 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP6P35125 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP6P35125 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP6P35125 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
USP6P35125 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP6P35125 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP6P35125 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP6P35125 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP6P35125 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6P35125 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6P35125 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
USP6P35125 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC21.21■□□□□ 0.99
USP6P35125 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC21.21■□□□□ 0.99
USP6P35125 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC21.21■□□□□ 0.99
USP6P35125 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6P35125 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP6P35125 AC023310.1-201ENST00000554836 735 ntBASIC21.21■□□□□ 0.99
USP6P35125 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP6P35125 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC21.21■□□□□ 0.99
USP6P35125 TBCB-211ENST00000589996 724 ntTSL 3 BASIC21.21■□□□□ 0.99
USP6P35125 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6P35125 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6P35125 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
USP6P35125 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
USP6P35125 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP6P35125 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.21■□□□□ 0.99
USP6P35125 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC21.21■□□□□ 0.99
USP6P35125 FOS-202ENST00000535987 1402 ntTSL 2 BASIC21.21■□□□□ 0.99
USP6P35125 MFF-204ENST00000353339 2186 ntTSL 5 BASIC21.21■□□□□ 0.99
USP6P35125 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6P35125 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6P35125 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC21.21■□□□□ 0.99
USP6P35125 AC007969.1-201ENST00000433675 447 ntBASIC21.21■□□□□ 0.99
USP6P35125 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP6P35125 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC21.21■□□□□ 0.99
USP6P35125 Z93015.1-201ENST00000451718 390 ntBASIC21.21■□□□□ 0.99
USP6P35125 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC21.21■□□□□ 0.99
USP6P35125 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
USP6P35125 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC21.21■□□□□ 0.99
USP6P35125 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP6P35125 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC21.21■□□□□ 0.99
USP6P35125 KLK3-211ENST00000597483 810 ntTSL 2 BASIC21.21■□□□□ 0.99
USP6P35125 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC21.21■□□□□ 0.99
USP6P35125 BX539320.1-201ENST00000623759 877 ntBASIC21.21■□□□□ 0.99
USP6P35125 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6P35125 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6P35125 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6P35125 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC21.2■□□□□ 0.98
USP6P35125 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC21.2■□□□□ 0.98
USP6P35125 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC21.2■□□□□ 0.98
USP6P35125 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6P35125 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6P35125 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC21.2■□□□□ 0.98
USP6P35125 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6P35125 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC21.2■□□□□ 0.98
USP6P35125 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC21.2■□□□□ 0.98
USP6P35125 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC21.2■□□□□ 0.98
USP6P35125 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC21.2■□□□□ 0.98
USP6P35125 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC21.2■□□□□ 0.98
USP6P35125 AC091271.1-201ENST00000611877 1162 ntBASIC21.2■□□□□ 0.98
USP6P35125 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP6P35125 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP6P35125 AD000864.1-201ENST00000624076 2295 ntBASIC21.2■□□□□ 0.98
USP6P35125 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.2■□□□□ 0.98
USP6P35125 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC21.2■□□□□ 0.98
USP6P35125 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.2■□□□□ 0.98
USP6P35125 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
USP6P35125 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC21.19■□□□□ 0.98
USP6P35125 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.19■□□□□ 0.98
USP6P35125 AL596087.1-201ENST00000400979 1969 ntBASIC21.19■□□□□ 0.98
USP6P35125 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC21.19■□□□□ 0.98
USP6P35125 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
USP6P35125 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC21.19■□□□□ 0.98
USP6P35125 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC21.19■□□□□ 0.98
USP6P35125 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
USP6P35125 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
USP6P35125 KLF2P2-201ENST00000416807 1039 ntBASIC21.19■□□□□ 0.98
USP6P35125 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC21.19■□□□□ 0.98
USP6P35125 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC21.19■□□□□ 0.98
USP6P35125 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC21.19■□□□□ 0.98
USP6P35125 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC21.19■□□□□ 0.98
USP6P35125 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms