Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.19■□□□□ 0.34
HOXC8P31273 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC8P31273 AL606495.2-201ENST00000605867 535 ntBASIC17.19■□□□□ 0.34
HOXC8P31273 AL354718.3-201ENST00000616414 581 ntBASIC17.19■□□□□ 0.34
HOXC8P31273 CR382287.1-201ENST00000623954 586 ntBASIC17.19■□□□□ 0.34
HOXC8P31273 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
HOXC8P31273 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC8P31273 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
HOXC8P31273 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC8P31273 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.19■□□□□ 0.34
HOXC8P31273 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC8P31273 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HOXC8P31273 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HOXC8P31273 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
HOXC8P31273 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.18■□□□□ 0.34
HOXC8P31273 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.18■□□□□ 0.34
HOXC8P31273 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
HOXC8P31273 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 KRT8P44-201ENST00000441609 1350 ntBASIC17.18■□□□□ 0.34
HOXC8P31273 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HOXC8P31273 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.18■□□□□ 0.34
HOXC8P31273 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.18■□□□□ 0.34
HOXC8P31273 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.18■□□□□ 0.34
HOXC8P31273 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.18■□□□□ 0.34
HOXC8P31273 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.18■□□□□ 0.34
HOXC8P31273 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.18■□□□□ 0.34
HOXC8P31273 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.18■□□□□ 0.34
HOXC8P31273 RN7SL219P-201ENST00000582872 296 ntBASIC17.18■□□□□ 0.34
HOXC8P31273 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.18■□□□□ 0.34
HOXC8P31273 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 AC009542.2-202ENST00000619004 1067 ntBASIC17.18■□□□□ 0.34
HOXC8P31273 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.18■□□□□ 0.34
HOXC8P31273 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.18■□□□□ 0.34
HOXC8P31273 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HOXC8P31273 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HOXC8P31273 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.18■□□□□ 0.34
HOXC8P31273 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HOXC8P31273 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC8P31273 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC8P31273 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC8P31273 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC8P31273 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.17■□□□□ 0.34
HOXC8P31273 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC8P31273 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC8P31273 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC8P31273 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.17■□□□□ 0.34
HOXC8P31273 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HOXC8P31273 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC8P31273 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.17■□□□□ 0.34
HOXC8P31273 RPL13AP20-201ENST00000459725 609 ntBASIC17.17■□□□□ 0.34
HOXC8P31273 FAM86HP-204ENST00000513466 959 ntBASIC17.17■□□□□ 0.34
HOXC8P31273 GPR182-203ENST00000622922 591 ntBASIC17.17■□□□□ 0.34
HOXC8P31273 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC8P31273 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HOXC8P31273 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC8P31273 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HOXC8P31273 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.17■□□□□ 0.34
HOXC8P31273 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC8P31273 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
HOXC8P31273 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC8P31273 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC8P31273 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HOXC8P31273 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC8P31273 AL133338.1-201ENST00000565695 1517 ntBASIC17.16■□□□□ 0.34
HOXC8P31273 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HOXC8P31273 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXC8P31273 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC8P31273 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXC8P31273 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXC8P31273 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXC8P31273 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC8P31273 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
HOXC8P31273 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.16■□□□□ 0.34
HOXC8P31273 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms