Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.55■□□□□ 0.72
TM4SF1P30408 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.55■□□□□ 0.72
TM4SF1P30408 POM121L10P-201ENST00000436994 1285 ntBASIC19.55■□□□□ 0.72
TM4SF1P30408 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF1P30408 CNN2P10-201ENST00000443067 918 ntBASIC19.55■□□□□ 0.72
TM4SF1P30408 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.55■□□□□ 0.72
TM4SF1P30408 RN7SL769P-201ENST00000469386 295 ntBASIC19.55■□□□□ 0.72
TM4SF1P30408 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.55■□□□□ 0.72
TM4SF1P30408 MIR4722-201ENST00000578292 60 ntBASIC19.55■□□□□ 0.72
TM4SF1P30408 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF1P30408 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF1P30408 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF1P30408 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF1P30408 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.54■□□□□ 0.72
TM4SF1P30408 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF1P30408 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TM4SF1P30408 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF1P30408 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF1P30408 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TM4SF1P30408 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.54■□□□□ 0.72
TM4SF1P30408 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF1P30408 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF1P30408 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.54■□□□□ 0.72
TM4SF1P30408 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.54■□□□□ 0.72
TM4SF1P30408 HSPB1P2-201ENST00000448722 546 ntBASIC19.54■□□□□ 0.72
TM4SF1P30408 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF1P30408 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TM4SF1P30408 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.54■□□□□ 0.72
TM4SF1P30408 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.54■□□□□ 0.72
TM4SF1P30408 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.54■□□□□ 0.72
TM4SF1P30408 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.54■□□□□ 0.72
TM4SF1P30408 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.54■□□□□ 0.72
TM4SF1P30408 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.54■□□□□ 0.72
TM4SF1P30408 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.54■□□□□ 0.72
TM4SF1P30408 AC138627.1-207ENST00000641560 1006 ntBASIC19.54■□□□□ 0.72
TM4SF1P30408 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF1P30408 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TM4SF1P30408 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.54■□□□□ 0.72
TM4SF1P30408 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF1P30408 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF1P30408 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF1P30408 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF1P30408 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF1P30408 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.53■□□□□ 0.72
TM4SF1P30408 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.53■□□□□ 0.72
TM4SF1P30408 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF1P30408 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF1P30408 AC022211.2-201ENST00000585075 2527 ntBASIC19.53■□□□□ 0.72
TM4SF1P30408 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.53■□□□□ 0.72
TM4SF1P30408 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TM4SF1P30408 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF1P30408 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF1P30408 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF1P30408 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.53■□□□□ 0.72
TM4SF1P30408 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
TM4SF1P30408 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.53■□□□□ 0.72
TM4SF1P30408 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.53■□□□□ 0.72
TM4SF1P30408 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.53■□□□□ 0.72
TM4SF1P30408 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TM4SF1P30408 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TM4SF1P30408 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF1P30408 AC126915.1-201ENST00000522847 1038 ntBASIC19.53■□□□□ 0.72
TM4SF1P30408 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF1P30408 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TM4SF1P30408 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF1P30408 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.53■□□□□ 0.72
TM4SF1P30408 ECM1P1-201ENST00000604092 1279 ntBASIC19.53■□□□□ 0.72
TM4SF1P30408 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.53■□□□□ 0.72
TM4SF1P30408 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.53■□□□□ 0.72
TM4SF1P30408 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.53■□□□□ 0.72
TM4SF1P30408 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TM4SF1P30408 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF1P30408 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
TM4SF1P30408 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF1P30408 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF1P30408 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF1P30408 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TM4SF1P30408 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
TM4SF1P30408 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF1P30408 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TM4SF1P30408 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.52■□□□□ 0.72
TM4SF1P30408 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TM4SF1P30408 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
TM4SF1P30408 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.52■□□□□ 0.72
TM4SF1P30408 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF1P30408 FXNP2-201ENST00000411625 547 ntBASIC19.52■□□□□ 0.72
TM4SF1P30408 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.52■□□□□ 0.72
TM4SF1P30408 KRTAP19-9P-201ENST00000421795 191 ntBASIC19.52■□□□□ 0.72
TM4SF1P30408 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms