Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
CD40LGP29965 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CD40LGP29965 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
CD40LGP29965 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 ARMC10P1-201ENST00000313754 855 ntBASIC14.25□□□□□ -0.13
CD40LGP29965 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
CD40LGP29965 HBZP1-201ENST00000354915 429 ntBASIC14.25□□□□□ -0.13
CD40LGP29965 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.25□□□□□ -0.13
CD40LGP29965 HLA-F-220ENST00000434407 884 ntBASIC14.25□□□□□ -0.13
CD40LGP29965 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 VENTXP5-201ENST00000523979 775 ntBASIC14.25□□□□□ -0.13
CD40LGP29965 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.25□□□□□ -0.13
CD40LGP29965 AL121956.5-201ENST00000625261 221 ntBASIC14.25□□□□□ -0.13
CD40LGP29965 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40LGP29965 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.25□□□□□ -0.13
CD40LGP29965 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CD40LGP29965 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.25□□□□□ -0.13
CD40LGP29965 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.25□□□□□ -0.13
CD40LGP29965 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.25□□□□□ -0.13
CD40LGP29965 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CD40LGP29965 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40LGP29965 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.25□□□□□ -0.13
CD40LGP29965 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CD40LGP29965 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40LGP29965 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40LGP29965 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40LGP29965 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40LGP29965 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CD40LGP29965 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CD40LGP29965 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.24□□□□□ -0.13
CD40LGP29965 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.24□□□□□ -0.13
CD40LGP29965 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.24□□□□□ -0.13
CD40LGP29965 BX640514.1-201ENST00000583223 1918 ntBASIC14.24□□□□□ -0.13
CD40LGP29965 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
CD40LGP29965 ACTG1P4-201ENST00000425123 1122 ntBASIC14.24□□□□□ -0.13
CD40LGP29965 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.24□□□□□ -0.13
CD40LGP29965 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.24□□□□□ -0.13
CD40LGP29965 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.24□□□□□ -0.13
CD40LGP29965 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.24□□□□□ -0.13
CD40LGP29965 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.24□□□□□ -0.13
CD40LGP29965 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CD40LGP29965 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 AC027601.5-201ENST00000624065 2482 ntBASIC14.24□□□□□ -0.13
CD40LGP29965 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.24□□□□□ -0.13
CD40LGP29965 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 DGCR9-201ENST00000609630 2415 ntBASIC14.24□□□□□ -0.13
CD40LGP29965 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
CD40LGP29965 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40LGP29965 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.24□□□□□ -0.13
CD40LGP29965 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.23□□□□□ -0.13
CD40LGP29965 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 COL6A4P2-202ENST00000504443 2753 ntBASIC14.23□□□□□ -0.13
CD40LGP29965 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms