Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.2■□□□□ 0.02
PTPN6P29350 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
PTPN6P29350 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN6P29350 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN6P29350 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PTPN6P29350 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PTPN6P29350 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PTPN6P29350 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN6P29350 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN6P29350 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN6P29350 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN6P29350 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 AC009090.5-201ENST00000624886 2285 ntBASIC15.19■□□□□ 0.02
PTPN6P29350 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN6P29350 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PTPN6P29350 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN6P29350 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
PTPN6P29350 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PTPN6P29350 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN6P29350 AL671277.1-201ENST00000429656 993 ntBASIC15.19■□□□□ 0.02
PTPN6P29350 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PTPN6P29350 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.19■□□□□ 0.02
PTPN6P29350 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN6P29350 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.19■□□□□ 0.02
PTPN6P29350 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.19■□□□□ 0.02
PTPN6P29350 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PTPN6P29350 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN6P29350 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN6P29350 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN6P29350 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PTPN6P29350 AC092127.1-201ENST00000567093 3455 ntBASIC15.19■□□□□ 0.02
PTPN6P29350 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN6P29350 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PTPN6P29350 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PTPN6P29350 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 TSPY26P-202ENST00000565928 3884 ntBASIC15.19■□□□□ 0.02
PTPN6P29350 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN6P29350 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN6P29350 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN6P29350 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN6P29350 AC087481.3-201ENST00000602886 1894 ntBASIC15.18■□□□□ 0.02
PTPN6P29350 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN6P29350 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN6P29350 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN6P29350 AC112693.3-201ENST00000624819 1983 ntBASIC15.18■□□□□ 0.02
PTPN6P29350 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN6P29350 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PTPN6P29350 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
PTPN6P29350 FOXO1B-201ENST00000504678 1527 ntBASIC15.18■□□□□ 0.02
PTPN6P29350 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PTPN6P29350 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN6P29350 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.18■□□□□ 0.02
PTPN6P29350 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN6P29350 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN6P29350 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN6P29350 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN6P29350 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN6P29350 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.18■□□□□ 0.02
PTPN6P29350 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN6P29350 FAM86C2P-203ENST00000528684 1004 ntBASIC15.18■□□□□ 0.02
PTPN6P29350 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN6P29350 RARRES2P8-201ENST00000566335 367 ntBASIC15.18■□□□□ 0.02
PTPN6P29350 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN6P29350 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN6P29350 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.18■□□□□ 0.02
PTPN6P29350 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.18■□□□□ 0.02
PTPN6P29350 AL596442.2-201ENST00000610240 980 ntBASIC15.18■□□□□ 0.02
PTPN6P29350 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms