Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.74□□□□□ -0.05
ABCD3P28288 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
ABCD3P28288 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
ABCD3P28288 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.74□□□□□ -0.05
ABCD3P28288 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.74□□□□□ -0.05
ABCD3P28288 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.74□□□□□ -0.05
ABCD3P28288 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.74□□□□□ -0.05
ABCD3P28288 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.74□□□□□ -0.05
ABCD3P28288 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.74□□□□□ -0.05
ABCD3P28288 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.74□□□□□ -0.05
ABCD3P28288 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.74□□□□□ -0.05
ABCD3P28288 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.74□□□□□ -0.05
ABCD3P28288 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.74□□□□□ -0.05
ABCD3P28288 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.74□□□□□ -0.05
ABCD3P28288 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.74□□□□□ -0.05
ABCD3P28288 AL033527.5-202ENST00000641632 1098 ntBASIC14.74□□□□□ -0.05
ABCD3P28288 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.74□□□□□ -0.05
ABCD3P28288 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.74□□□□□ -0.05
ABCD3P28288 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.74□□□□□ -0.05
ABCD3P28288 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.74□□□□□ -0.05
ABCD3P28288 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCD3P28288 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCD3P28288 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCD3P28288 AC008741.2-201ENST00000612792 3115 ntBASIC14.73□□□□□ -0.05
ABCD3P28288 AC087499.5-201ENST00000452760 1342 ntBASIC14.73□□□□□ -0.05
ABCD3P28288 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ABCD3P28288 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.73□□□□□ -0.05
ABCD3P28288 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ABCD3P28288 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.73□□□□□ -0.05
ABCD3P28288 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCD3P28288 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCD3P28288 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCD3P28288 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
ABCD3P28288 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ABCD3P28288 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCD3P28288 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.73□□□□□ -0.05
ABCD3P28288 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCD3P28288 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCD3P28288 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCD3P28288 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.73□□□□□ -0.05
ABCD3P28288 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCD3P28288 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.73□□□□□ -0.05
ABCD3P28288 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.73□□□□□ -0.05
ABCD3P28288 MIR6069-201ENST00000620069 79 ntBASIC14.73□□□□□ -0.05
ABCD3P28288 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCD3P28288 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
ABCD3P28288 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.73□□□□□ -0.05
ABCD3P28288 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ABCD3P28288 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCD3P28288 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ABCD3P28288 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCD3P28288 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCD3P28288 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCD3P28288 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.73□□□□□ -0.05
ABCD3P28288 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.73□□□□□ -0.05
ABCD3P28288 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ABCD3P28288 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ABCD3P28288 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCD3P28288 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ABCD3P28288 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ABCD3P28288 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ABCD3P28288 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ABCD3P28288 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.72□□□□□ -0.05
ABCD3P28288 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.72□□□□□ -0.05
ABCD3P28288 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ABCD3P28288 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCD3P28288 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.72□□□□□ -0.05
ABCD3P28288 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.72□□□□□ -0.05
ABCD3P28288 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.72□□□□□ -0.05
ABCD3P28288 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.72□□□□□ -0.05
ABCD3P28288 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ABCD3P28288 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.72□□□□□ -0.05
ABCD3P28288 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.72□□□□□ -0.05
ABCD3P28288 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCD3P28288 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCD3P28288 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ABCD3P28288 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ABCD3P28288 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms