Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN3P26045 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN3P26045 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN3P26045 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN3P26045 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN3P26045 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN3P26045 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN3P26045 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN3P26045 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN3P26045 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN3P26045 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN3P26045 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN3P26045 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
PTPN3P26045 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN3P26045 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTPN3P26045 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN3P26045 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN3P26045 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN3P26045 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN3P26045 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN3P26045 MIR4313-201ENST00000580760 101 ntBASIC16.3■□□□□ 0.2
PTPN3P26045 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN3P26045 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.3■□□□□ 0.2
PTPN3P26045 AL596442.2-201ENST00000610240 980 ntBASIC16.3■□□□□ 0.2
PTPN3P26045 AP001059.3-201ENST00000619053 235 ntBASIC16.3■□□□□ 0.2
PTPN3P26045 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PTPN3P26045 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN3P26045 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN3P26045 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PTPN3P26045 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTPN3P26045 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN3P26045 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN3P26045 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN3P26045 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN3P26045 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
PTPN3P26045 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTPN3P26045 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
PTPN3P26045 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN3P26045 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.29■□□□□ 0.2
PTPN3P26045 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN3P26045 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 SNHG9-202ENST00000564014 471 ntBASIC16.29■□□□□ 0.2
PTPN3P26045 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 AL450472.2-201ENST00000603663 1156 ntBASIC16.29■□□□□ 0.2
PTPN3P26045 AC007967.4-201ENST00000614700 386 ntBASIC16.29■□□□□ 0.2
PTPN3P26045 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN3P26045 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 AC092384.3-202ENST00000564646 2873 ntBASIC16.29■□□□□ 0.2
PTPN3P26045 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
PTPN3P26045 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN3P26045 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTPN3P26045 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN3P26045 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTPN3P26045 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTPN3P26045 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTPN3P26045 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PTPN3P26045 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTPN3P26045 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN3P26045 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PTPN3P26045 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 DNAJB3-202ENST00000449667 1266 ntBASIC16.28■□□□□ 0.2
PTPN3P26045 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 MIR4453-201ENST00000584019 89 ntBASIC16.28■□□□□ 0.2
PTPN3P26045 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 AL133215.2-201ENST00000609242 977 ntBASIC16.28■□□□□ 0.2
PTPN3P26045 AC023511.2-201ENST00000618803 211 ntBASIC16.28■□□□□ 0.2
PTPN3P26045 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN3P26045 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN3P26045 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PTPN3P26045 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PTPN3P26045 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PTPN3P26045 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PTPN3P26045 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN3P26045 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms