Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 PKD1P1-201ENST00000458669 6805 ntBASIC19.2■□□□□ 0.66
ATP2B4P23634 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
ATP2B4P23634 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATP2B4P23634 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP2B4P23634 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ATP2B4P23634 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP2B4P23634 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP2B4P23634 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP2B4P23634 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B4P23634 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B4P23634 AC244669.2-201ENST00000612320 853 ntBASIC19.2■□□□□ 0.66
ATP2B4P23634 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ATP2B4P23634 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP2B4P23634 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATP2B4P23634 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B4P23634 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATP2B4P23634 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B4P23634 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.2■□□□□ 0.66
ATP2B4P23634 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ATP2B4P23634 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B4P23634 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATP2B4P23634 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2B4P23634 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
ATP2B4P23634 AC011477.6-201ENST00000604980 1927 ntBASIC19.19■□□□□ 0.66
ATP2B4P23634 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
ATP2B4P23634 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP2B4P23634 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ATP2B4P23634 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
ATP2B4P23634 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
ATP2B4P23634 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ATP2B4P23634 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 BRWD1P1-201ENST00000401091 371 ntBASIC19.19■□□□□ 0.66
ATP2B4P23634 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP2B4P23634 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP2B4P23634 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP2B4P23634 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2B4P23634 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
ATP2B4P23634 AC015910.1-201ENST00000579400 975 ntBASIC19.19■□□□□ 0.66
ATP2B4P23634 AC107373.2-201ENST00000607735 490 ntBASIC19.19■□□□□ 0.66
ATP2B4P23634 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP2B4P23634 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B4P23634 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2B4P23634 AC080080.1-201ENST00000625121 2420 ntBASIC19.19■□□□□ 0.66
ATP2B4P23634 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ATP2B4P23634 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B4P23634 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
ATP2B4P23634 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B4P23634 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
ATP2B4P23634 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B4P23634 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2B4P23634 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B4P23634 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B4P23634 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP2B4P23634 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B4P23634 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATP2B4P23634 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP2B4P23634 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ATP2B4P23634 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B4P23634 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP2B4P23634 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.18■□□□□ 0.66
ATP2B4P23634 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B4P23634 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.18■□□□□ 0.66
ATP2B4P23634 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B4P23634 KRT90P-201ENST00000549264 1064 ntBASIC19.18■□□□□ 0.66
ATP2B4P23634 GNRHR2-203ENST00000581100 1187 ntBASIC19.18■□□□□ 0.66
ATP2B4P23634 RHOXF1P1-202ENST00000635473 501 ntBASIC19.18■□□□□ 0.66
ATP2B4P23634 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2B4P23634 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ATP2B4P23634 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B4P23634 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B4P23634 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B4P23634 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATP2B4P23634 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms