Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.21■□□□□ 0.67
LMNB1P20700 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.21■□□□□ 0.67
LMNB1P20700 RNA5SP486-201ENST00000515961 83 ntBASIC19.21■□□□□ 0.67
LMNB1P20700 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.21■□□□□ 0.67
LMNB1P20700 AP005019.2-201ENST00000615104 511 ntBASIC19.21■□□□□ 0.67
LMNB1P20700 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.21■□□□□ 0.67
LMNB1P20700 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.21■□□□□ 0.67
LMNB1P20700 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.21■□□□□ 0.67
LMNB1P20700 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LMNB1P20700 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.21■□□□□ 0.67
LMNB1P20700 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.21■□□□□ 0.67
LMNB1P20700 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMNB1P20700 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LMNB1P20700 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.2■□□□□ 0.66
LMNB1P20700 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNB1P20700 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.2■□□□□ 0.66
LMNB1P20700 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.2■□□□□ 0.66
LMNB1P20700 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNB1P20700 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.2■□□□□ 0.66
LMNB1P20700 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.2■□□□□ 0.66
LMNB1P20700 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.2■□□□□ 0.66
LMNB1P20700 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNB1P20700 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNB1P20700 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.2■□□□□ 0.66
LMNB1P20700 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.2■□□□□ 0.66
LMNB1P20700 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.2■□□□□ 0.66
LMNB1P20700 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNB1P20700 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.2■□□□□ 0.66
LMNB1P20700 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNB1P20700 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.2■□□□□ 0.66
LMNB1P20700 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LMNB1P20700 CYP46A4P-201ENST00000414953 267 ntBASIC19.2■□□□□ 0.66
LMNB1P20700 CD8B2-202ENST00000417670 633 ntBASIC19.2■□□□□ 0.66
LMNB1P20700 AL133466.1-201ENST00000447582 150 ntBASIC19.2■□□□□ 0.66
LMNB1P20700 FTLP1-201ENST00000449155 526 ntBASIC19.2■□□□□ 0.66
LMNB1P20700 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.2■□□□□ 0.66
LMNB1P20700 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.2■□□□□ 0.66
LMNB1P20700 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNB1P20700 HNRNPUP1-201ENST00000554987 333 ntBASIC19.2■□□□□ 0.66
LMNB1P20700 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.2■□□□□ 0.66
LMNB1P20700 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
LMNB1P20700 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNB1P20700 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LMNB1P20700 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNB1P20700 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
LMNB1P20700 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.2■□□□□ 0.66
LMNB1P20700 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.2■□□□□ 0.66
LMNB1P20700 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.2■□□□□ 0.66
LMNB1P20700 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LMNB1P20700 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNB1P20700 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMNB1P20700 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.19■□□□□ 0.66
LMNB1P20700 BNIP3P1-202ENST00000550043 1585 ntBASIC19.19■□□□□ 0.66
LMNB1P20700 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMNB1P20700 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMNB1P20700 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LMNB1P20700 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMNB1P20700 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMNB1P20700 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMNB1P20700 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMNB1P20700 MIR769-201ENST00000390225 118 ntBASIC19.19■□□□□ 0.66
LMNB1P20700 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.19■□□□□ 0.66
LMNB1P20700 AC245100.5-201ENST00000452108 331 ntBASIC19.19■□□□□ 0.66
LMNB1P20700 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.19■□□□□ 0.66
LMNB1P20700 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.19■□□□□ 0.66
LMNB1P20700 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.19■□□□□ 0.66
LMNB1P20700 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.19■□□□□ 0.66
LMNB1P20700 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.19■□□□□ 0.66
LMNB1P20700 AL645608.8-201ENST00000606034 2086 ntBASIC19.19■□□□□ 0.66
LMNB1P20700 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LMNB1P20700 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.19■□□□□ 0.66
LMNB1P20700 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMNB1P20700 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.19■□□□□ 0.66
LMNB1P20700 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LMNB1P20700 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LMNB1P20700 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.18■□□□□ 0.66
LMNB1P20700 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.18■□□□□ 0.66
LMNB1P20700 AL590640.2-201ENST00000457038 527 ntBASIC19.18■□□□□ 0.66
LMNB1P20700 KRT18P43-201ENST00000469825 1281 ntBASIC19.18■□□□□ 0.66
LMNB1P20700 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.18■□□□□ 0.66
LMNB1P20700 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMNB1P20700 AC015910.1-201ENST00000579400 975 ntBASIC19.18■□□□□ 0.66
LMNB1P20700 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.18■□□□□ 0.66
LMNB1P20700 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms