Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3BP20337 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB3BP20337 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3BP20337 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RAB3BP20337 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3BP20337 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RAB3BP20337 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB3BP20337 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAB3BP20337 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
RAB3BP20337 AC012569.1-201ENST00000591191 1524 ntBASIC14.09□□□□□ -0.15
RAB3BP20337 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB3BP20337 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RAB3BP20337 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB3BP20337 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB3BP20337 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB3BP20337 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAB3BP20337 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB3BP20337 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAB3BP20337 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
RAB3BP20337 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB3BP20337 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.08□□□□□ -0.15
RAB3BP20337 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.08□□□□□ -0.15
RAB3BP20337 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
RAB3BP20337 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB3BP20337 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB3BP20337 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB3BP20337 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB3BP20337 RBM17P3-201ENST00000417687 1192 ntBASIC14.08□□□□□ -0.16
RAB3BP20337 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
RAB3BP20337 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB3BP20337 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB3BP20337 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB3BP20337 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.08□□□□□ -0.16
RAB3BP20337 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB3BP20337 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB3BP20337 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB3BP20337 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.08□□□□□ -0.16
RAB3BP20337 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
RAB3BP20337 AC021097.1-201ENST00000607902 574 ntBASIC14.08□□□□□ -0.16
RAB3BP20337 GGTLC5P-201ENST00000617623 998 ntBASIC14.08□□□□□ -0.16
RAB3BP20337 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
RAB3BP20337 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB3BP20337 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB3BP20337 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 AGAP7P-201ENST00000582299 2062 ntBASIC14.08□□□□□ -0.16
RAB3BP20337 AGAP14-201ENST00000624701 2060 ntBASIC14.08□□□□□ -0.16
RAB3BP20337 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB3BP20337 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB3BP20337 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB3BP20337 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB3BP20337 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RAB3BP20337 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB3BP20337 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 LINC00528-201ENST00000600723 2160 ntBASIC14.07□□□□□ -0.16
RAB3BP20337 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.07□□□□□ -0.16
RAB3BP20337 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
RAB3BP20337 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 AL359258.3-201ENST00000622910 2331 ntBASIC14.07□□□□□ -0.16
RAB3BP20337 AC232323.1-201ENST00000540724 2099 ntBASIC14.07□□□□□ -0.16
RAB3BP20337 REXO1L5P-201ENST00000622260 2098 ntBASIC14.07□□□□□ -0.16
RAB3BP20337 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms