Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 AC067930.6-201ENST00000623257 4947 ntBASIC14.91□□□□□ -0.02
TNFRSF1BP20333 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF1BP20333 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 GPX1P2-201ENST00000429271 606 ntBASIC14.9□□□□□ -0.02
TNFRSF1BP20333 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 PRYP6-201ENST00000514804 343 ntBASIC14.9□□□□□ -0.02
TNFRSF1BP20333 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 AC004877.2-201ENST00000623941 599 ntBASIC14.9□□□□□ -0.02
TNFRSF1BP20333 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.9□□□□□ -0.02
TNFRSF1BP20333 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 PMS2P7-201ENST00000506558 1336 ntBASIC14.9□□□□□ -0.02
TNFRSF1BP20333 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF1BP20333 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF1BP20333 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms