Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT3P12035 AC018529.1-201ENST00000613063 361 ntBASIC16.88■□□□□ 0.29
KRT3P12035 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT3P12035 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.88■□□□□ 0.29
KRT3P12035 AC134684.3-201ENST00000641758 218 ntBASIC16.88■□□□□ 0.29
KRT3P12035 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
KRT3P12035 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT3P12035 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT3P12035 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT3P12035 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT3P12035 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT3P12035 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
KRT3P12035 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT3P12035 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT3P12035 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT3P12035 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
KRT3P12035 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KRT3P12035 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KRT3P12035 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 AC007326.2-201ENST00000624224 7579 ntBASIC16.87■□□□□ 0.29
KRT3P12035 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
KRT3P12035 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
KRT3P12035 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
KRT3P12035 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 AP006288.1-201ENST00000446065 395 ntBASIC16.87■□□□□ 0.29
KRT3P12035 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT3P12035 AC023141.5-201ENST00000458585 616 ntBASIC16.87■□□□□ 0.29
KRT3P12035 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.87■□□□□ 0.29
KRT3P12035 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT3P12035 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT3P12035 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.87■□□□□ 0.29
KRT3P12035 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT3P12035 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT3P12035 AC009093.7-201ENST00000623853 1223 ntBASIC16.87■□□□□ 0.29
KRT3P12035 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 AL162727.3-201ENST00000635661 2787 ntBASIC16.87■□□□□ 0.29
KRT3P12035 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT3P12035 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
KRT3P12035 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
KRT3P12035 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT3P12035 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT3P12035 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.86■□□□□ 0.29
KRT3P12035 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
KRT3P12035 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 CYP4F24P-201ENST00000586049 1580 ntBASIC16.86■□□□□ 0.29
KRT3P12035 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.86■□□□□ 0.29
KRT3P12035 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
KRT3P12035 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
KRT3P12035 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT3P12035 AL353705.2-201ENST00000428243 662 ntBASIC16.86■□□□□ 0.29
KRT3P12035 CNN2P11-201ENST00000429351 262 ntBASIC16.86■□□□□ 0.29
KRT3P12035 AC004967.1-201ENST00000453589 447 ntBASIC16.86■□□□□ 0.29
KRT3P12035 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.86■□□□□ 0.29
KRT3P12035 SNHG9-202ENST00000564014 471 ntBASIC16.86■□□□□ 0.29
KRT3P12035 AC026150.2-201ENST00000564693 1156 ntBASIC16.86■□□□□ 0.29
KRT3P12035 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
KRT3P12035 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.86■□□□□ 0.29
KRT3P12035 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.86■□□□□ 0.29
KRT3P12035 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.86■□□□□ 0.29
KRT3P12035 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT3P12035 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.86■□□□□ 0.29
KRT3P12035 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
KRT3P12035 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT3P12035 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
KRT3P12035 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms