Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.88□□□□□ -0.03
UBL4AP11441 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBL4AP11441 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
UBL4AP11441 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBL4AP11441 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.88□□□□□ -0.03
UBL4AP11441 AL592309.1-201ENST00000443127 649 ntBASIC14.88□□□□□ -0.03
UBL4AP11441 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.88□□□□□ -0.03
UBL4AP11441 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.88□□□□□ -0.03
UBL4AP11441 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.88□□□□□ -0.03
UBL4AP11441 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.88□□□□□ -0.03
UBL4AP11441 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBL4AP11441 AC092865.5-201ENST00000545435 363 ntBASIC14.88□□□□□ -0.03
UBL4AP11441 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.88□□□□□ -0.03
UBL4AP11441 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
UBL4AP11441 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBL4AP11441 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
UBL4AP11441 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
UBL4AP11441 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
UBL4AP11441 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
UBL4AP11441 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBL4AP11441 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
UBL4AP11441 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
UBL4AP11441 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBL4AP11441 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
UBL4AP11441 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
UBL4AP11441 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBL4AP11441 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
UBL4AP11441 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBL4AP11441 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBL4AP11441 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBL4AP11441 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBL4AP11441 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBL4AP11441 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBL4AP11441 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.87□□□□□ -0.03
UBL4AP11441 UXT-AS1-201ENST00000590504 1525 ntBASIC14.87□□□□□ -0.03
UBL4AP11441 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
UBL4AP11441 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.87□□□□□ -0.03
UBL4AP11441 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
UBL4AP11441 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.87□□□□□ -0.03
UBL4AP11441 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 UPF3AP3-201ENST00000420996 769 ntBASIC14.87□□□□□ -0.03
UBL4AP11441 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.87□□□□□ -0.03
UBL4AP11441 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.87□□□□□ -0.03
UBL4AP11441 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
UBL4AP11441 RNA5SP410-201ENST00000516285 106 ntBASIC14.87□□□□□ -0.03
UBL4AP11441 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.87□□□□□ -0.03
UBL4AP11441 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 LINC01225-203ENST00000563550 1244 ntBASIC14.87□□□□□ -0.03
UBL4AP11441 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.87□□□□□ -0.03
UBL4AP11441 AC022145.2-201ENST00000598203 171 ntBASIC14.87□□□□□ -0.03
UBL4AP11441 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.87□□□□□ -0.03
UBL4AP11441 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 LINC02447-202ENST00000501888 2146 ntBASIC14.87□□□□□ -0.03
UBL4AP11441 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.87□□□□□ -0.03
UBL4AP11441 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.87□□□□□ -0.03
UBL4AP11441 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
UBL4AP11441 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.87□□□□□ -0.03
UBL4AP11441 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBL4AP11441 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.86□□□□□ -0.03
UBL4AP11441 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.86□□□□□ -0.03
UBL4AP11441 CDC14C-201ENST00000428251 1719 ntBASIC14.86□□□□□ -0.03
UBL4AP11441 AC069224.1-201ENST00000566372 1715 ntBASIC14.86□□□□□ -0.03
UBL4AP11441 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 AL365203.3-201ENST00000609742 2057 ntBASIC14.86□□□□□ -0.03
UBL4AP11441 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.86□□□□□ -0.03
UBL4AP11441 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
UBL4AP11441 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
UBL4AP11441 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms